[←][→] ath   At2g43290 Gene
functional annotation
Function   Calcium-binding EF-hand family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010200 [list] [network] response to chitin  (304 genes)  IEA  
GO:0009751 [list] [network] response to salicylic acid  (438 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0014070 [list] [network] response to organic cyclic compound  (807 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:0071310 [list] [network] cellular response to organic substance  (1485 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0010008 [list] [network] endosome membrane  (52 genes)  IDA  
GO:0012505 [list] [network] endomembrane system  (2093 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG ath04626 [list] [network] Plant-pathogen interaction (204 genes)
Protein NP_565996.1 
BLAST NP_565996.1 
Orthologous [Ortholog page] AGD11 (ath)  UNE14 (ath)  AT4G03290 (ath)  AT1G05990 (ath)  LOC4336258 (osa)  LOC4351825 (osa)  LOC7459875 (ppo)  LOC7474678 (ppo)  LOC7488613 (ppo)  LOC7491758 (ppo)  LOC9272185 (osa)  LOC11422197 (mtr)  LOC11435247 (mtr)  LOC11440276 (mtr)  LOC18106917 (ppo)  LOC25492667 (mtr)  LOC100527487 (gma)  LOC100781506 (gma)  LOC100796922 (gma)  LOC100798114 (gma)  LOC100803032 (gma)  LOC100806637 (gma)  LOC100810081 (gma)  LOC100813656 (gma)  LOC101244290 (sly)  LOC101253386 (sly)  LOC101254631 (sly)  LOC101260796 (sly)  LOC101267131 (sly)  LOC103833326 (bra)  LOC103843577 (bra)  LOC103849283 (bra)  LOC103858062 (bra)  LOC103858707 (bra)  LOC103859223 (bra)  LOC103863662 (bra)  LOC103870665 (bra)  LOC103873524 (bra)  LOC109120532 (sly)  LOC112325914 (ppo)  LOC123041569 (tae)  LOC123049548 (tae)  LOC123083308 (tae)  LOC123151662 (tae)  LOC123185647 (tae)  LOC123412972 (hvu)  LOC123430457 (hvu) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_565996.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_565996.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
Genes directly connected with MSS3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.8 TCH2 EF hand calcium-binding protein family [detail] 833755
8.2 CML23 calmodulin like 23 [detail] 842958
7.7 NHL2 NDR1/HIN1-like 2 [detail] 820337
6.9 GPAT3 glycerol-3-phosphate acyltransferase 3 [detail] 827165
6.4 AT1G67880 beta-1,4-N-acetylglucosaminyltransferase family protein [detail] 843116
6.1 AT3G54200 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 824587
6.1 AT4G21740 uncharacterized protein [detail] 828262
4.8 GPAT2 glycerol-3-phosphate acyltransferase 2 [detail] 839558
3.9 LBD11 LOB domain-containing protein 11 [detail] 817398
Coexpressed
gene list		 [Coexpressed gene list for MSS3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266447_at
266447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266447_at
266447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266447_at
266447_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818931      
Refseq ID (protein) NP_565996.1 


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