[←][→] ath   AT2G43370 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IBA  
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001324057.1  NP_850395.1 
BLAST NP_001324057.1  NP_850395.1 
Orthologous [Ortholog page] LOC4347560 (osa)  LOC11442373 (mtr)  LOC100261074 (vvi)  LOC100383273 (zma)  LOC100807978 (gma)  LOC100814109 (gma)  LOC101256810 (sly)  LOC103858068 (bra) 
Subcellular
localization
wolf
cyto 6,  pero 1,  mito 1,  extr 1,  cysk 1,  golg 1  (predict for NP_001324057.1)
nucl 10  (predict for NP_850395.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001324057.1)
other 6  (predict for NP_850395.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath03040 Spliceosome 2
ath03013 RNA transport 2
Genes directly connected with AT2G43370 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT1G09280 rhodanese-like domain protein [detail] 837449
6.8 AT1G78910 Pseudouridine synthase family protein [detail] 844229
6.5 ISI1 binding protein [detail] 828889
6.0 AT2G41020 WW domain-containing protein [detail] 818702
5.9 AT3G05250 RING/U-box superfamily protein [detail] 819689
5.9 RAD51D DNA repair RAD51-like protein [detail] 837289
5.7 AT4G31270 sequence-specific DNA binding transcription factor [detail] 829254
5.1 AT4G27610 intracellular protein transporter [detail] 828872
4.8 AT1G09710 Homeodomain-like superfamily protein [detail] 837499
4.5 ATXRCC1 BRCT domain-containing DNA repair protein [detail] 844382
Coexpressed
gene list		 [Coexpressed gene list for AT2G43370]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260533_at
260533_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260533_at
260533_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260533_at
260533_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818938      
Refseq ID (protein) NP_001324057.1 
NP_850395.1 


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