[←][→] ath   At2g45190 Gene
functional annotation
Function   Plant-specific transcription factor YABBY family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0090706 [list] [network] specification of plant organ position  (1 genes)  IMP  
GO:0010450 [list] [network] inflorescence meristem growth  (2 genes)  IMP  
GO:0010158 [list] [network] abaxial cell fate specification  (10 genes)  IGI  
GO:1902183 [list] [network] regulation of shoot apical meristem development  (10 genes)  IMP  
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO:2000024 [list] [network] regulation of leaf development  (22 genes)  IMP  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (23 genes)  IMP  
GO:0009933 [list] [network] meristem structural organization  (66 genes)  IMP  
GO:0045165 [list] [network] cell fate commitment  (81 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (171 genes)  IMP  
GO:0010154 [list] [network] fruit development  (1349 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM TAS  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001323472.1  NP_566037.1 
BLAST NP_001323472.1  NP_566037.1 
Orthologous [Ortholog page] LOC4330130 (osa)  LOC4336518 (osa)  LOC4349074 (osa)  LOC7465527 (ppo)  LOC7488885 (ppo)  LOC11410996 (mtr)  LOC18093984 (ppo)  LOC18096332 (ppo)  LOC25491643 (mtr)  LOC100781267 (gma)  LOC100786175 (gma)  LOC100794423 (gma)  FILA (gma)  YABBY1a (sly)  YABBY1b (sly)  LOC103830131 (bra)  LOC103858163 (bra)  LOC103866196 (bra)  LOC123041704 (tae)  LOC123054031 (tae)  LOC123127847 (tae)  LOC123137614 (tae)  LOC123144945 (tae)  LOC123189917 (tae)  LOC123404138 (hvu)  LOC123427359 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for NP_001323472.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_566037.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001323472.1)
other 6,  chlo 4  (predict for NP_566037.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
Genes directly connected with AFO on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.5 YAB3 Plant-specific transcription factor YABBY family protein [detail] 827914
9.0 HB25 homeobox protein 25 [detail] 836666
6.8 YAB2 Plant-specific transcription factor YABBY family protein [detail] 3766682
6.8 ERL2 ERECTA-like 2 [detail] 830609
6.6 YAB5 plant-specific transcription factor YABBY family protein [detail] 817199
5.3 AT2G27385 Pollen Ole e 1 allergen and extensin family protein [detail] 817283
4.4 WOX1 WUSCHEL related homeobox 1 [detail] 821325
Coexpressed
gene list		 [Coexpressed gene list for AFO]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245138_at
245138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245138_at
245138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245138_at
245138_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819127      
Refseq ID (protein) NP_001323472.1 
NP_566037.1 


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