functional annotation |
Function |
Plant-specific transcription factor YABBY family protein |
|
GO BP |
GO:0090706 [list] [network] specification of plant organ position
|
(1 genes)
|
IMP
|
|
GO:0010450 [list] [network] inflorescence meristem growth
|
(2 genes)
|
IMP
|
|
GO:0010158 [list] [network] abaxial cell fate specification
|
(8 genes)
|
IBA
IGI
|
|
GO:1902183 [list] [network] regulation of shoot apical meristem development
|
(10 genes)
|
IBA
IMP
|
|
GO:0010093 [list] [network] specification of floral organ identity
|
(13 genes)
|
IMP
|
|
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis
|
(23 genes)
|
IBA
IMP
|
|
GO:0009933 [list] [network] meristem structural organization
|
(54 genes)
|
IMP
|
|
GO:0045165 [list] [network] cell fate commitment
|
(58 genes)
|
IBA
IMP
|
|
GO:2000024 [list] [network] regulation of leaf development
|
(73 genes)
|
IBA
IMP
|
|
GO:0009909 [list] [network] regulation of flower development
|
(157 genes)
|
IMP
|
|
GO:0010154 [list] [network] fruit development
|
(753 genes)
|
IBA
IMP
|
|
|
GO CC |
|
GO MF |
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
ISS
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IEA
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
KEGG |
|
|
Protein |
NP_001323472.1
NP_566037.1
|
BLAST |
NP_001323472.1
NP_566037.1
|
Orthologous |
[Ortholog page]
LOC542129 (zma)
LOC542130 (zma)
LOC542744 (zma)
LOC4330130 (osa)
LOC4349074 (osa)
LOC7465527 (ppo)
LOC7488885 (ppo)
LOC11410996 (mtr)
LOC25491643 (mtr)
LOC100243667 (vvi)
LOC100267708 (vvi)
LOC100781267 (gma)
LOC100786175 (gma)
LOC100794423 (gma)
FILA (gma)
YABBY1a (sly)
YABBY1b (sly)
LOC103830131 (bra)
LOC103858163 (bra)
LOC103866196 (bra)
|
Subcellular localization wolf |
nucl 6,
chlo 1,
cyto 1
|
(predict for NP_001323472.1)
|
nucl 9,
chlo 1,
cyto 1
|
(predict for NP_566037.1)
|
|
Subcellular localization TargetP |
mito 5,
other 4
|
(predict for NP_001323472.1)
|
other 6,
chlo 4
|
(predict for NP_566037.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with AFO on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
12.4 |
YAB3 |
Plant-specific transcription factor YABBY family protein |
[detail] |
827914 |
6.8 |
HB25 |
homeobox protein 25 |
[detail] |
836666 |
6.8 |
YAB2 |
Plant-specific transcription factor YABBY family protein |
[detail] |
3766682 |
6.5 |
AT4G17810 |
C2H2 and C2HC zinc fingers superfamily protein |
[detail] |
827503 |
6.2 |
YAB5 |
plant-specific transcription factor YABBY family protein |
[detail] |
817199 |
6.0 |
TCP5 |
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |
[detail] |
836218 |
4.6 |
AT5G10310 |
EPIDERMAL PATTERNING FACTOR-like protein |
[detail] |
830895 |
|
Coexpressed gene list |
[Coexpressed gene list for AFO]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
245138_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
245138_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
245138_at
X axis is samples (xls file), and Y axis is log-expression.
|