[←][→] ath   At2g46340 Gene
functional annotation
Function   SPA (suppressor of phyA-105) protein family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048575 [list] [network] short-day photoperiodism, flowering  (4 genes)  IMP  
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (16 genes)  IMP  
GO:0009585 [list] [network] red, far-red light phototransduction  (20 genes)  IGI  
GO:0010218 [list] [network] response to far red light  (48 genes)  IEP  
GO:0010017 [list] [network] red or far-red light signaling pathway  (52 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (94 genes)  IDA IMP  
GO:0010114 [list] [network] response to red light  (101 genes)  IEP  
GO:0009637 [list] [network] response to blue light  (160 genes)  IDA IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0006468 [list] [network] protein phosphorylation  (639 genes)  IEA  
GO CC
GO:0016604 [list] [network] nuclear body  (86 genes)  IDA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0004672 [list] [network] protein kinase activity  (768 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (39 genes)
Protein NP_001325255.1  NP_182157.2 
BLAST NP_001325255.1  NP_182157.2 
Orthologous [Ortholog page] SPA2 (ath)  LOC4339663 (osa)  LOC7479329 (ppo)  LOC7492759 (ppo)  LOC11437198 (mtr)  LOC18097053 (ppo)  LOC25500742 (mtr)  LOC100776980 (gma)  LOC100778303 (gma)  LOC100784300 (gma)  LOC100799267 (gma)  LOC100802144 (gma)  LOC100813452 (gma)  LOC101249027 (sly)  LOC101263834 (sly)  LOC103833904 (bra)  LOC103858211 (bra)  LOC103866477 (bra)  LOC123069052 (tae)  LOC123147298 (tae)  LOC123183200 (tae)  LOC123451067 (hvu) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for NP_001325255.1)
nucl 9,  chlo 1,  cysk 1  (predict for NP_182157.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001325255.1)
other 8  (predict for NP_182157.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00902 Monoterpenoid biosynthesis 2
Genes directly connected with SPA1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.4 TZP zinc knuckle (CCHC-type) family protein [detail] 834383
9.0 SIGE sigma factor E [detail] 832477
8.2 SDR1 NAD(P)-binding Rossmann-fold superfamily protein [detail] 825294
8.0 SPA4 SPA1-related 4 [detail] 841743
5.7 GLR3.3 glutamate receptor 3.3 [detail] 840859
5.6 IPK1 inositol-pentakisphosphate 2-kinase 1 [detail] 834292
5.2 AT5G59770 Protein-tyrosine phosphatase-like, PTPLA [detail] 836098
5.1 ANT1 aromatic and neutral transporter 1 [detail] 820363
5.1 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 822663
4.5 ULI3 Cysteine/Histidine-rich C1 domain family protein [detail] 836114
Coexpressed
gene list		 [Coexpressed gene list for SPA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263780_at
263780_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263780_at
263780_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263780_at
263780_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819242      
Refseq ID (protein) NP_001325255.1 
NP_182157.2 


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