[←][→] ath   AT2G46560 Gene
functional annotation
Function   transducin family protein / WD-40 repeat family protein  
GO BP
GO:0007035 [list] [network] vacuolar acidification  (6 genes)  IBA  
GO CC
GO:0043291 [list] [network] RAVE complex  (1 genes)  IBA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO MF
KEGG
Protein NP_001323787.1  NP_001323788.1  NP_182179.3 
BLAST NP_001323787.1  NP_001323788.1  NP_182179.3 
Orthologous [Ortholog page] LOC4325848 (osa)  LOC7497260 (ppo)  LOC25500663 (mtr)  LOC100255258 (vvi)  LOC100789935 (gma)  LOC100795225 (gma)  LOC101249217 (sly)  LOC103635990 (zma)  LOC103866455 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  vacu 1,  cyto 1,  pero 1,  chlo_mito 1,  E.R._vacu 1,  cyto_pero 1  (predict for NP_001323787.1)
nucl 4,  chlo 2,  nucl_plas 2,  cyto 1,  cysk 1  (predict for NP_001323788.1)
nucl 7,  cyto 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_182179.3)
Subcellular
localization
TargetP
other 6  (predict for NP_001323787.1)
other 5  (predict for NP_001323788.1)
mito 8  (predict for NP_182179.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with AT2G46560 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.3 AT2G45540 WD-40 repeat family protein / beige-like protein [detail] 819162
12.2 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein [detail] 832375
11.8 UPL2 ubiquitin-protein ligase 2 [detail] 843368
11.6 AT1G58230 binding protein [detail] 842191
9.1 SAC9 sacI homology domain-containing protein / WW domain-containing protein [detail] 825146
9.0 AT5G27970 ARM repeat superfamily protein [detail] 832867
8.3 AT4G11270 Transducin/WD40 repeat-like superfamily protein [detail] 826729
7.1 AT2G36810 ARM repeat superfamily protein [detail] 818253
7.0 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [detail] 818244
6.7 AT5G18525 protein serine/threonine kinase [detail] 2745988
Coexpressed
gene list		 [Coexpressed gene list for AT2G46560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265455_at
265455_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265455_at
265455_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265455_at
265455_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819268      
Refseq ID (protein) NP_001323787.1 
NP_001323788.1 
NP_182179.3 


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