[←][→] ath   At2g46610 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001325235.1  NP_001325236.1  NP_182184.1  NP_973702.1 
BLAST NP_001325235.1  NP_001325236.1  NP_182184.1  NP_973702.1 
Orthologous [Ortholog page] RS31 (ath)  RS40 (ath)  RS41 (ath)  LOC4328133 (osa)  LOC4334964 (osa)  LOC7454468 (ppo)  LOC7464900 (ppo)  LOC7482121 (ppo)  LOC7492794 (ppo)  LOC7494037 (ppo)  LOC7497271 (ppo)  LOC11422261 (mtr)  LOC11445062 (mtr)  LOC25500953 (mtr)  LOC100781534 (gma)  LOC100796509 (gma)  LOC100797709 (gma)  LOC100797778 (gma)  LOC100801043 (gma)  LOC100815452 (gma)  LOC101246991 (sly)  LOC101258786 (sly)  LOC101263057 (sly)  LOC101264097 (sly)  LOC101266564 (sly)  LOC103834867 (bra)  LOC103857154 (bra)  LOC103863268 (bra)  LOC103866451 (bra)  LOC123050970 (tae)  LOC123094071 (tae)  LOC123099280 (tae)  LOC123106211 (tae)  LOC123131876 (tae)  LOC123135841 (tae)  LOC123143365 (tae)  LOC123186938 (tae)  LOC123401142 (hvu)  LOC123431480 (hvu)  LOC123450013 (hvu) 
Subcellular
localization
wolf
nucl 4,  extr 4,  cyto 1,  mito 1  (predict for NP_001325235.1)
nucl 4,  extr 4,  cyto 1,  mito 1  (predict for NP_001325236.1)
nucl 8,  cyto 2  (predict for NP_182184.1)
nucl 10  (predict for NP_973702.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001325235.1)
scret 9  (predict for NP_001325236.1)
other 8,  mito 3  (predict for NP_182184.1)
other 7  (predict for NP_973702.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
Genes directly connected with RS31a on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.6 RS31 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 825359
5.5 RS2Z33 arginine/serine-rich zinc knuckle-containing protein 33 [detail] 818311
5.4 SCL33 SC35-like splicing factor 33 [detail] 841976
4.4 AT4G17440 chromogranin (DUF1639) [detail] 827455
Coexpressed
gene list		 [Coexpressed gene list for RS31a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265449_at
265449_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265449_at
265449_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265449_at
265449_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819273      
Refseq ID (protein) NP_001325235.1 
NP_001325236.1 
NP_182184.1 
NP_973702.1 


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