[][] ath   AT2G46780 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein
GO BP
GO:0006397 [list] [network] mRNA processing  (376 genes)  IBA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_001324122.1  NP_182201.4 
BLAST NP_001324122.1  NP_182201.4 
Orthologous [Ortholog page] LOC7455359 (ppo)LOC7478798 (ppo)LOC25500626 (mtr)LOC100257521 (vvi)LOC100782484 (gma)LOC100786208 (gma)LOC100786226 (gma)LOC100788899 (gma)LOC103866305 (bra)LOC103866433 (bra)
Subcellular
localization
wolf
nucl 10  (predict for NP_001324122.1)
nucl 10  (predict for NP_182201.4)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001324122.1)
other 8,  mito 4  (predict for NP_182201.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G46780 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.1 BZIP61 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 824981
6.4 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 844161
6.1 AT3G08600 transmembrane protein, putative (DUF1191) [detail] 820007
5.8 AT3G62570 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 825431
5.6 AT2G39870 hypothetical protein [detail] 818574
5.0 AT5G66800 membrane-associated kinase regulator-like protein [detail] 836813
Coexpressed
gene list
[Coexpressed gene list for AT2G46780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266715_at
266715_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266715_at
266715_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
266715_at
266715_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 819291    
Refseq ID (protein) NP_001324122.1 
NP_182201.4 


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