[←][→] ath   At2g47240 Gene
functional annotation
Function   AMP-dependent synthetase and ligase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010143 [list] [network] cutin biosynthetic process  (12 genes)  IMP  
GO:0010025 [list] [network] wax biosynthetic process  (30 genes)  IMP  
GO:0006631 [list] [network] fatty acid metabolic process  (214 genes)  TAS  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0031957 [list] [network] very long-chain fatty acid-CoA ligase activity  (2 genes)  IDA  
GO:0004467 [list] [network] long-chain fatty acid-CoA ligase activity  (12 genes)  IDA  
KEGG ath00061 [list] [network] Fatty acid biosynthesis (43 genes)
ath00071 [list] [network] Fatty acid degradation (47 genes)
ath01212 [list] [network] Fatty acid metabolism (70 genes)
ath04146 [list] [network] Peroxisome (88 genes)
Protein NP_001031554.1  NP_001318440.1  NP_001325159.1  NP_182246.1 
BLAST NP_001031554.1  NP_001318440.1  NP_001325159.1  NP_182246.1 
Orthologous [Ortholog page] LOC4337714 (osa)  LOC7481419 (ppo)  LOC11419994 (mtr)  LOC11427214 (mtr)  LOC100790536 (gma)  LOC100807687 (gma)  LOC100816578 (gma)  LOC100818394 (gma)  LOC101262955 (sly)  LOC103843798 (bra)  LOC103866392 (bra)  LOC123110258 (tae)  LOC123180312 (tae)  LOC123189915 (tae)  LOC123417511 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_001031554.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_001318440.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001325159.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_182246.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031554.1)
other 8  (predict for NP_001318440.1)
other 6,  mito 4  (predict for NP_001325159.1)
other 8  (predict for NP_182246.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 2
ath04626 Plant-pathogen interaction 2
ath02010 ABC transporters 2
Genes directly connected with LACS1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.8 KCS5 3-ketoacyl-CoA synthase 5 [detail] 839131
5.7 PEL3 HXXXD-type acyl-transferase family protein [detail] 832459
5.6 AT3G05600 alpha/beta-Hydrolases superfamily protein [detail] 819726
Coexpressed
gene list		 [Coexpressed gene list for LACS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260531_at
260531_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260531_at
260531_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260531_at
260531_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819337      
Refseq ID (protein) NP_001031554.1 
NP_001318440.1 
NP_001325159.1 
NP_182246.1 


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