[←][→] ath   AT2G47240 Gene
functional annotation
Function   AMP-dependent synthetase and ligase family protein  
GO BP
GO:0010143 [list] [network] cutin biosynthetic process  (17 genes)  IMP  
GO:0010025 [list] [network] wax biosynthetic process  (23 genes)  IMP  
GO:0006631 [list] [network] fatty acid metabolic process  (238 genes)  TAS  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0031957 [list] [network] very long-chain fatty acid-CoA ligase activity  (2 genes)  IDA  
GO:0102391 [list] [network] decanoate-CoA ligase activity  (9 genes)  IEA  
GO:0003996 [list] [network] acyl-CoA ligase activity  (10 genes)  IEA  
GO:0004467 [list] [network] long-chain fatty acid-CoA ligase activity  (10 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00061 [list] [network] Fatty acid biosynthesis (43 genes)
ath00071 [list] [network] Fatty acid degradation (47 genes)
ath01212 [list] [network] Fatty acid metabolism (69 genes)
ath04146 [list] [network] Peroxisome (87 genes)
Protein NP_001031554.1  NP_001318440.1  NP_001325159.1  NP_182246.1 
BLAST NP_001031554.1  NP_001318440.1  NP_001325159.1  NP_182246.1 
Orthologous [Ortholog page] LOC4337714 (osa)  LOC7481419 (ppo)  LOC11419994 (mtr)  LOC11427214 (mtr)  LOC100248587 (vvi)  LOC100279270 (zma)  LOC100790536 (gma)  LOC100807687 (gma)  LOC100816578 (gma)  LOC100818394 (gma)  LOC101262955 (sly)  LOC103843798 (bra)  LOC103866392 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_001031554.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_001318440.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001325159.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_182246.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031554.1)
other 8  (predict for NP_001318440.1)
other 6,  mito 4  (predict for NP_001325159.1)
other 8  (predict for NP_182246.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 2
Genes directly connected with LACS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 PDF2 protodermal factor 2 [detail] 825828
5.6 KCS5 3-ketoacyl-CoA synthase 5 [detail] 839131
5.5 AT3G05600 alpha/beta-Hydrolases superfamily protein [detail] 819726
4.8 AT1G14820 Sec14p-like phosphatidylinositol transfer family protein [detail] 838047
Coexpressed
gene list		 [Coexpressed gene list for LACS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260531_at
260531_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260531_at
260531_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260531_at
260531_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819337      
Refseq ID (protein) NP_001031554.1 
NP_001318440.1 
NP_001325159.1 
NP_182246.1 


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