[←][→] ath   AT2G47580 Gene
functional annotation
Function   spliceosomal protein U1A  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA ISS  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IGI  
GO CC
GO:0005685 [list] [network] U1 snRNP  (17 genes)  IBA IDA ISS  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0030619 [list] [network] U1 snRNA binding  (6 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_182280.1 
BLAST NP_182280.1 
Orthologous [Ortholog page] LOC4337846 (osa)  LOC7495243 (ppo)  LOC25493023 (mtr)  LOC100243572 (vvi)  LOC100277950 (zma)  LOC100500002 (gma)  LOC100777062 (gma)  LOC101244611 (sly)  LOC103866362 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_182280.1)
Subcellular
localization
TargetP
other 9  (predict for NP_182280.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath03013 RNA transport 2
Genes directly connected with U1A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 AT1G26750 hypothetical protein [detail] 839216
5.9 AT3G51010 protein translocase subunit [detail] 824265
5.9 PHB2 prohibitin 2 [detail] 839228
4.8 AT3G56210 ARM repeat superfamily protein [detail] 824787
Coexpressed
gene list		 [Coexpressed gene list for U1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245124_at
245124_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245124_at
245124_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245124_at
245124_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819371      
Refseq ID (protein) NP_182280.1 


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