[←][→] ath   At2g47580 Gene
functional annotation
Function   spliceosomal protein U1A      
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (105 genes)  ISS  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IGI  
GO CC
GO:0005685 [list] [network] U1 snRNP  (4 genes)  IDA ISS  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_182280.1 
BLAST NP_182280.1 
Orthologous [Ortholog page] LOC4337846 (osa)  LOC7495243 (ppo)  LOC18109788 (ppo)  LOC25493023 (mtr)  LOC25499590 (mtr)  LOC100500002 (gma)  LOC100777062 (gma)  LOC101244611 (sly)  LOC103866362 (bra)  LOC123113625 (tae)  LOC123180562 (tae)  LOC123191664 (tae)  LOC123425889 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_182280.1)
Subcellular
localization
TargetP
other 9  (predict for NP_182280.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03040 Spliceosome 2
ath03020 RNA polymerase 2
Genes directly connected with U1A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 SPT42 SPT4 homolog 2 [detail] 836487
6.0 AT3G51010 protein translocase subunit [detail] 824265
6.0 PFD6 prefoldin 6 [detail] 839878
5.2 AT5G05670 signal recognition particle binding protein [detail] 830451
Coexpressed
gene list		 [Coexpressed gene list for U1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245124_at
245124_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245124_at
245124_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245124_at
245124_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819371      
Refseq ID (protein) NP_182280.1 


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