[←][→] ath   AT2G47680 Gene
functional annotation
Function   zinc finger (CCCH type) helicase family protein  
GO BP
GO:0045943 [list] [network] positive regulation of transcription by RNA polymerase I  (3 genes)  IBA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003678 [list] [network] DNA helicase activity  (34 genes)  IEA  
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_182290.1 
BLAST NP_182290.1 
Orthologous [Ortholog page] LOC9270656 (osa)  LOC11416820 (mtr)  LOC100250411 (vvi)  LOC101257970 (sly)  LOC103634689 (zma)  LOC103866354 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for NP_182290.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_182290.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 4
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00350 Tyrosine metabolism 2
ath00620 Pyruvate metabolism 2
Genes directly connected with AT2G47680 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.7 AT4G30090 golgin family A protein [detail] 829132
4.6 sks3 SKU5 similar 3 [detail] 834900
4.5 ASP2 aspartate aminotransferase 2 [detail] 832075
Coexpressed
gene list		 [Coexpressed gene list for AT2G47680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266511_at
266511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266511_at
266511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266511_at
266511_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819381      
Refseq ID (protein) NP_182290.1 


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