[←][→] ath   At2g47700 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0090227 [list] [network] regulation of red or far-red light signaling pathway  (3 genes)  IMP  
GO:0010218 [list] [network] response to far red light  (48 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (94 genes)  IMP  
GO:0010114 [list] [network] response to red light  (101 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP  
GO:0010629 [list] [network] negative regulation of gene expression  (396 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (2177 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001324431.1  NP_850478.1 
BLAST NP_001324431.1  NP_850478.1 
Orthologous [Ortholog page] LOC103866352 (bra) 
Subcellular
localization
wolf
nucl 4,  mito 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001324431.1)
nucl 9,  mito 1,  plas 1,  mito_plas 1  (predict for NP_850478.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001324431.1)
other 9  (predict for NP_850478.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04075 Plant hormone signal transduction 2
Genes directly connected with RFI2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 bHLH121 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 821523
7.2 AT4G32760 ENTH/VHS/GAT family protein [detail] 829412
7.0 LRB1 BTB/POZ/Kelch-associated protein [detail] 819234
6.1 AT5G66050 Wound-responsive family protein [detail] 836735
5.1 BEH2 BES1/BZR1 homolog 2 [detail] 829831
Coexpressed
gene list		 [Coexpressed gene list for RFI2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266513_at
266513_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266513_at
266513_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266513_at
266513_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819383      
Refseq ID (protein) NP_001324431.1 
NP_850478.1 


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