[←][→] ath   AT2G47890 Gene
functional annotation
Function   B-box type zinc finger protein with CCT domain-containing protein  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001324500.1  NP_182310.1  NP_973712.1 
BLAST NP_001324500.1  NP_182310.1  NP_973712.1 
Orthologous [Ortholog page] LOC4332842 (osa)  LOC4344220 (osa)  LOC11434778 (mtr)  LOC100259713 (vvi)  LOC100383648 (zma)  COL9 (gma)  LOC100796874 (gma)  LOC100798117 (gma)  COL15 (gma)  LOC101258781 (sly)  LOC103647917 (zma)  LOC103655775 (zma)  LOC103866340 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  extr 1  (predict for NP_001324500.1)
nucl 4,  cyto 4,  chlo 1,  extr 1,  golg 1  (predict for NP_182310.1)
nucl 3,  golg 2,  cyto_nucl 2,  cyto 1,  mito 1,  cysk_nucl 1,  golg_plas 1  (predict for NP_973712.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001324500.1)
other 9  (predict for NP_182310.1)
other 9  (predict for NP_973712.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
Genes directly connected with AT2G47890 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 GPX6 glutathione peroxidase 6 [detail] 826765
7.3 LZF1 light-regulated zinc finger protein 1 [detail] 844196
5.8 PRR5 two-component response regulator-like protein [detail] 832518
5.0 AT1G70420 DNA ligase-like protein, putative (DUF1645) [detail] 843378
4.5 AT5G24460 RING-H2 zinc finger protein [detail] 832517
4.5 AT2G37580 RING/U-box superfamily protein [detail] 818334
Coexpressed
gene list		 [Coexpressed gene list for AT2G47890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266514_at
266514_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266514_at
266514_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266514_at
266514_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819401      
Refseq ID (protein) NP_001324500.1 
NP_182310.1 
NP_973712.1 


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