[←][→] ath   At2g47990 Gene
functional annotation
Function   transducin family protein / WD-40 repeat family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009561 [list] [network] megagametogenesis  (80 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (163 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (169 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_182320.1 
BLAST NP_182320.1 
Orthologous [Ortholog page] LOC4342750 (osa)  LOC7457974 (ppo)  LOC7458238 (ppo)  LOC11420033 (mtr)  LOC100806066 (gma)  LOC101251776 (sly)  LOC102668105 (gma)  LOC103855657 (bra)  LOC112325821 (ppo)  LOC123149655 (tae)  LOC123160359 (tae)  LOC123170430 (tae)  LOC123407750 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_182320.1)
Subcellular
localization
TargetP
other 8  (predict for NP_182320.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
Genes directly connected with SWA1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.7 AT3G58660 Ribosomal protein L1p/L10e family [detail] 825035
12.5 PWP2 periodic tryptophan protein 2 [detail] 838115
11.4 AT3G22660 rRNA processing protein-like protein [detail] 821837
11.3 AT1G65030 Transducin/WD40 repeat-like superfamily protein [detail] 842811
7.7 ASHR2 ASH1-related protein 2 [detail] 816483
6.6 TK1b Thymidine kinase [detail] 832371
Coexpressed
gene list		 [Coexpressed gene list for SWA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266510_at
266510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266510_at
266510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266510_at
266510_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819411      
Refseq ID (protein) NP_182320.1 


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