[←][→] ath   AT2G47990 Gene
functional annotation
Function   transducin family protein / WD-40 repeat family protein  
GO BP
GO:0045943 [list] [network] positive regulation of transcription by RNA polymerase I  (3 genes)  IBA  
GO:0009561 [list] [network] megagametogenesis  (72 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IBA IMP  
GO:0051301 [list] [network] cell division  (352 genes)  IEA  
GO:0007049 [list] [network] cell cycle  (516 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_182320.1 
BLAST NP_182320.1 
Orthologous [Ortholog page] LOC4342750 (osa)  LOC7457974 (ppo)  LOC11420033 (mtr)  LOC100264761 (vvi)  LOC100284315 (zma)  LOC100806066 (gma)  LOC101251776 (sly)  LOC102668105 (gma)  LOC103855657 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_182320.1)
Subcellular
localization
TargetP
other 8  (predict for NP_182320.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with SWA1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.4 AT3G58660 Ribosomal protein L1p/L10e family [detail] 825035
12.0 PWP2 periodic tryptophan protein 2 [detail] 838115
11.9 YAO Transducin/WD40 repeat-like superfamily protein [detail] 825889
10.9 AT1G65030 Transducin/WD40 repeat-like superfamily protein [detail] 842811
9.6 PNM1 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836217
8.8 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 816274
8.4 AT1G06380 Ribosomal protein L1p/L10e family [detail] 837149
7.1 ASHR2 ASH1-related protein 2 [detail] 816483
6.7 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838618
Coexpressed
gene list		 [Coexpressed gene list for SWA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266510_at
266510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266510_at
266510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266510_at
266510_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819411      
Refseq ID (protein) NP_182320.1 


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