[←][→] ath   AT3G01160 Gene
functional annotation
Function   pre-rRNA-processing ESF1-like protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_566132.2 
BLAST NP_566132.2 
Orthologous [Ortholog page] LOC4343456 (osa)  LOC11411854 (mtr)  LOC11436057 (mtr)  LOC11440617 (mtr)  LOC100254034 (vvi)  LOC100278378 (zma)  LOC100785167 (gma)  LOC100788064 (gma)  LOC101268053 (sly)  LOC103870952 (bra)  LOC109122271 (vvi)  LOC112421236 (mtr) 
Subcellular
localization
wolf
nucl 9  (predict for NP_566132.2)
Subcellular
localization
TargetP
other 8  (predict for NP_566132.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT3G01160 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.3 AT1G69070 nucleolar-like protein [detail] 843239
14.5 AT4G02400 U3 ribonucleoprotein (Utp) family protein [detail] 828039
14.2 AT1G13160 ARM repeat superfamily protein [detail] 837874
13.7 AT2G40430 Nop53 protein [detail] 818636
12.3 AT5G17930 MIF4G domain-containing protein / MA3 domain-containing protein [detail] 831661
12.0 AT1G60640 stress response protein [detail] 842358
11.4 AT2G24990 Serine/threonine-protein kinase Rio1 [detail] 817038
11.1 AT5G48240 Rrp15p protein [detail] 834877
11.0 AT5G38720 ribosomal RNA-processing 7 protein [detail] 833863
10.5 SDN3 small RNA degrading nuclease 3 [detail] 836859
10.3 AT5G65900 DEA(D/H)-box RNA helicase family protein [detail] 836719
10.1 AT4G28200 U3 small nucleolar RNA-associated-like protein [detail] 828935
9.9 AT3G49990 Low temperature viability protein [detail] 824161
9.6 AT5G50310 Galactose oxidase/kelch repeat superfamily protein [detail] 835096
9.2 AT3G02760 Class II aaRS and biotin synthetases superfamily protein [detail] 820930
7.1 AT3G43590 zinc knuckle (CCHC-type) family protein [detail] 823456
Coexpressed
gene list		 [Coexpressed gene list for AT3G01160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259278_at
259278_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259278_at
259278_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259278_at
259278_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820504      
Refseq ID (protein) NP_566132.2 


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