[←][→] ath   AT3G02040 Gene
functional annotation
Function   senescence-related gene 3  
GO BP
GO:0046475 [list] [network] glycerophospholipid catabolic process  (2 genes)  IBA  
GO:0030643 [list] [network] cellular phosphate ion homeostasis  (7 genes)  IMP  
GO:0006071 [list] [network] glycerol metabolic process  (24 genes)  IEA  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO CC
GO:0005623 [list] [network] cell  (76 genes)  IMP  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008889 [list] [network] glycerophosphodiester phosphodiesterase activity  (12 genes)  IDA  
GO:0000287 [list] [network] magnesium ion binding  (115 genes)  IDA  
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (96 genes)
Protein NP_566159.1 
BLAST NP_566159.1 
Orthologous [Ortholog page] GDPD2 (ath)  LOC4329468 (osa)  LOC7460574 (ppo)  LOC7495809 (ppo)  LOC11440032 (mtr)  LOC100191201 (zma)  LOC100261754 (vvi)  LOC100781085 (gma)  LOC100807698 (gma)  LOC101261081 (sly)  LOC103849862 (bra)  LOC103850206 (bra)  LOC103864052 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_566159.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_566159.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00750 Vitamin B6 metabolism 2
Genes directly connected with SRG3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.3 SPX1 SPX domain-containing protein 1 [detail] 832137
14.4 PAP17 purple acid phosphatase 17 [detail] 821047
12.9 PFA-DSP4 Phosphotyrosine protein phosphatases superfamily protein [detail] 825706
12.5 SPX2 SPX domain-containing protein 2 (SPX2) [detail] 817207
11.2 AT5G20790 transmembrane protein [detail] 832202
11.1 PS2 inorganic pyrophosphatase 1 [detail] 843632
10.3 SQD1 sulfoquinovosyldiacylglycerol 1 [detail] 829440
9.8 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [detail] 829728
8.3 PHF1 phosphate transporter traffic facilitator1 [detail] 824384
8.2 AT1G23110 fold protein [detail] 838919
7.9 PHT1;4 phosphate transporter 1;4 [detail] 818479
7.8 AT1G67600 Acid phosphatase/vanadium-dependent haloperoxidase-related protein [detail] 843081
7.5 AT3G04350 vacuolar sorting-associated protein (DUF946) [detail] 819590
7.5 AT2G37890 Mitochondrial substrate carrier family protein [detail] 818365
7.3 AT5G03545 expressed in response to phosphate starvation protein [detail] 831795
7.1 CRF8 Integrase-type DNA-binding superfamily protein [detail] 843453
4.5 OCT4 organic cation/carnitine transporter4 [detail] 821613
Coexpressed
gene list		 [Coexpressed gene list for SRG3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258856_at
258856_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258856_at
258856_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258856_at
258856_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821175      
Refseq ID (protein) NP_566159.1 


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