[←][→] ath   At3g02560 Gene
functional annotation
Function   Ribosomal protein S7e family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001319452.1  NP_186905.1  NP_850504.1 
BLAST NP_001319452.1  NP_186905.1  NP_850504.1 
Orthologous [Ortholog page] LOC542966 (tae)  AT5G16130 (ath)  AT1G48830 (ath)  LOC4332545 (osa)  LOC4332546 (osa)  LOC4338485 (osa)  LOC7468815 (ppo)  LOC11426970 (mtr)  LOC18097613 (ppo)  LOC18099488 (ppo)  LOC18099982 (ppo)  LOC25496878 (mtr)  LOC100305484 (gma)  LOC100499757 (gma)  LOC100499772 (gma)  LOC100500684 (gma)  LOC100527642 (gma)  LOC100527680 (gma)  LOC101255184 (sly)  LOC101268693 (sly)  LOC103843377 (bra)  LOC103846353 (bra)  LOC103851029 (bra)  LOC103856182 (bra)  LOC103858970 (bra)  LOC103870906 (bra)  LOC123042186 (tae)  LOC123085612 (tae)  LOC123092417 (tae)  LOC123116343 (tae)  LOC123427783 (hvu)  LOC123448874 (hvu) 
Subcellular
localization
wolf
cyto 4,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001319452.1)
cyto 4,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_186905.1)
cyto 4,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_850504.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001319452.1)
other 9  (predict for NP_186905.1)
other 9  (predict for NP_850504.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
Genes directly connected with AT3G02560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.2 AT3G02080 Ribosomal protein S19e family protein [detail] 821120
15.6 AT2G37190 Ribosomal protein L11 family protein [detail] 818295
15.1 PFL Ribosomal protein S13/S18 family [detail] 838884
13.6 AT5G23900 Ribosomal protein L13e family protein [detail] 832455
13.4 AT2G44120 Ribosomal protein L30/L7 family protein [detail] 819018
13.3 AT3G14600 Ribosomal protein L18ae/LX family protein [detail] 820688
13.1 AT5G62300 Ribosomal protein S10p/S20e family protein [detail] 836351
12.9 RPS15AD ribosomal protein S15A D [detail] 823747
12.4 AT1G74050 Ribosomal protein L6 family protein [detail] 843744
12.1 AT3G58700 Ribosomal L5P family protein [detail] 825039
11.7 AT1G25260 Ribosomal protein L10 family protein [detail] 839109
10.2 RPL16A ribosomal protein large subunit 16A [detail] 818874
9.2 PAB8 poly(A) binding protein 8 [detail] 841399
Coexpressed
gene list		 [Coexpressed gene list for AT3G02560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258486_at
258486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258486_at
258486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258486_at
258486_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821308      
Refseq ID (protein) NP_001319452.1 
NP_186905.1 
NP_850504.1 


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