[][] ath   AT3G02560 Gene
functional annotation
Function   Ribosomal protein S7e family protein
GO BP
GO:0042274 [list] [network] ribosomal small subunit biogenesis  (62 genes)  IBA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IBA  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (110 genes)  IBA IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_001319452.1  NP_186905.1  NP_850504.1 
BLAST NP_001319452.1  NP_186905.1  NP_850504.1 
Orthologous [Ortholog page] AT5G16130 (ath)AT1G48830 (ath)LOC4332545 (osa)LOC4332546 (osa)LOC4338485 (osa)LOC7468815 (ppo)LOC11426970 (mtr)LOC25496878 (mtr)LOC100193269 (zma)LOC100241243 (vvi)LOC100252536 (vvi)LOC100253080 (vvi)LOC100274227 (zma)LOC100305484 (gma)LOC100499757 (gma)LOC100499772 (gma)LOC100500684 (gma)LOC100527642 (gma)LOC100527680 (gma)LOC101255184 (sly)LOC101268693 (sly)LOC103650839 (zma)LOC103843377 (bra)LOC103851029 (bra)LOC103856182 (bra)LOC103858970 (bra)LOC103870906 (bra)
Subcellular
localization
wolf
cyto 4,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001319452.1)
cyto 4,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_186905.1)
cyto 4,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_850504.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001319452.1)
other 9  (predict for NP_186905.1)
other 9  (predict for NP_850504.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with AT3G02560 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
14.8 AT2G37190 Ribosomal protein L11 family protein [detail] 818295
14.7 AT3G02080 Ribosomal protein S19e family protein [detail] 821120
14.6 AT2G36160 Ribosomal protein S11 family protein [detail] 818188
13.9 RPS11-BETA ribosomal protein S11-beta [detail] 832439
13.3 RPS18C S18 ribosomal protein [detail] 826569
12.9 AT5G23900 Ribosomal protein L13e family protein [detail] 832455
12.8 AT1G74050 Ribosomal protein L6 family protein [detail] 843744
12.6 AT1G25260 Ribosomal protein L10 family protein [detail] 839109
12.0 RPS15AD ribosomal protein S15A D [detail] 823747
11.8 AT3G58700 Ribosomal L5P family protein [detail] 825039
Coexpressed
gene list
[Coexpressed gene list for AT3G02560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258486_at
258486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258486_at
258486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258486_at
258486_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 821308    
Refseq ID (protein) NP_001319452.1 
NP_186905.1 
NP_850504.1 


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