ATTED-II : GeneID search result

[←][→] ath AT3G02600 Gene

functional annotation

Function

lipid phosphate phosphatase 3

GO BP

GO:0006644 [list] [network] phospholipid metabolic process

(188 genes)

ISS

GO CC

GO:0005887 [list] [network] integral component of plasma membrane	(171 genes)	ISS
GO:0031969 [list] [network] chloroplast membrane	(259 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0008195 [list] [network] phosphatidate phosphatase activity

(9 genes)

ISS

KEGG

ath00561 [list] [network] Glycerolipid metabolism (61 genes)

ath00564 [list] [network] Glycerophospholipid metabolism (96 genes)

Protein

NP_001078095.1 NP_001078096.1 NP_001078097.1 NP_001078098.1 NP_001319453.1 NP_001327797.1 NP_001327798.1 NP_001327799.1 NP_001327800.1 NP_001327801.1 NP_001327802.1 NP_566177.1

BLAST

NP_001078095.1 NP_001078096.1 NP_001078097.1 NP_001078098.1 NP_001319453.1 NP_001327797.1 NP_001327798.1 NP_001327799.1 NP_001327800.1 NP_001327801.1 NP_001327802.1 NP_566177.1

Orthologous

[Ortholog page] PAP1 (ath) LPP2 (ath) LOC4325474 (osa) LOC4326857 (osa) LOC4345366 (osa) LOC4345367 (osa) LOC4346680 (osa) LOC7459815 (ppo) LOC7459816 (ppo) LOC7477450 (ppo) LOC7488376 (ppo) LOC11436764 (mtr) LOC11440130 (mtr) LOC25485465 (mtr) LOC25485468 (mtr) LOC100193193 (zma) LOC100241275 (vvi) LOC100242178 (vvi) LOC100254175 (vvi) LOC100259291 (vvi) LOC100273231 (zma) LOC100273865 (zma) LOC100775414 (gma) LOC100782531 (gma) LOC100784929 (gma) LOC100785459 (gma) LOC100800585 (gma) LOC100805924 (gma) LOC101267988 (sly) LOC101268277 (sly) LOC101268570 (sly) LOC103651387 (zma) LOC103827601 (bra) LOC103839503 (bra) LOC103842921 (bra) LOC103858975 (bra) LOC103870909 (bra)

Subcellular
localization
wolf

plas 4, chlo 2, E.R. 2, golg 1, E.R._vacu 1	(predict for NP_001078095.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001078096.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001078097.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001078098.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001319453.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001327797.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001327798.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001327799.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001327800.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001327801.1)
plas 6, cyto_plas 4, E.R. 1, cyto 1, E.R._vacu 1	(predict for NP_001327802.1)
plas 6, E.R. 1, golg 1, mito 1, vacu 1, cyto_E.R. 1	(predict for NP_566177.1)

Subcellular
localization
TargetP

mito 4	(predict for NP_001078095.1)
mito 9, other 6	(predict for NP_001078096.1)
mito 9, other 6	(predict for NP_001078097.1)
mito 9, other 6	(predict for NP_001078098.1)
mito 9, other 6	(predict for NP_001319453.1)
mito 9, other 6	(predict for NP_001327797.1)
mito 9, other 6	(predict for NP_001327798.1)
mito 9, other 6	(predict for NP_001327799.1)
mito 9, other 6	(predict for NP_001327800.1)
mito 9, other 6	(predict for NP_001327801.1)
mito 9, other 6	(predict for NP_001327802.1)
mito 3	(predict for NP_566177.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	2
ath00260	Glycine, serine and threonine metabolism	2

Genes directly connected with LPP3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.8	NTMC2T4	Calcium-dependent lipid-binding (CaLB domain) family protein	[detail]	825277
5.7	AT5G07630	lipid transporter	[detail]	830656
4.9	AVP1	Inorganic H pyrophosphatase family protein	[detail]	838138
3.7	VGT1	vacuolar glucose transporter 1	[detail]	821117

Coexpressed
gene list

[Coexpressed gene list for LPP3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258481_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258481_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258481_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	821299
Refseq ID (protein)	NP_001078095.1
	NP_001078096.1
	NP_001078097.1
	NP_001078098.1
	NP_001319453.1
	NP_001327797.1
	NP_001327798.1
	NP_001327799.1
	NP_001327800.1
	NP_001327801.1
	NP_001327802.1
	NP_566177.1

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