ATTED-II : GeneID search result

[←][→] ath AT3G02760 Gene

functional annotation

Function

Class II aaRS and biotin synthetases superfamily protein

GO BP

GO:0006427 [list] [network] histidyl-tRNA aminoacylation	(3 genes)	IBA
GO:0032543 [list] [network] mitochondrial translation	(15 genes)	IBA

GO CC

GO:0005829 [list] [network] cytosol	(3506 genes)	IBA IDA
GO:0005739 [list] [network] mitochondrion	(4405 genes)	IBA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IBA

GO MF

GO:0004821 [list] [network] histidine-tRNA ligase activity

(3 genes)

IBA

KEGG

ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (94 genes)

Protein

NP_001325800.1 NP_186925.4

BLAST

NP_001325800.1 NP_186925.4

Orthologous

[Ortholog page] LOC4337830 (osa) LOC7455249 (ppo) LOC25483747 (mtr) LOC100241489 (vvi) LOC100279212 (zma) LOC100777684 (gma) LOC100809535 (gma) LOC101251038 (sly) LOC103635898 (zma) LOC103843343 (bra) LOC103858979 (bra)

Subcellular
localization
wolf

chlo 9, cyto 1, plas 1, cyto_plas 1	(predict for NP_001325800.1)
chlo 9, cyto 1, plas 1, cyto_plas 1	(predict for NP_186925.4)

Subcellular
localization
TargetP

chlo 7	(predict for NP_001325800.1)
chlo 7	(predict for NP_186925.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	4

Genes directly connected with AT3G02760 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
10.6	AT3G24080	KRR1 family protein	[detail]	821994
9.2	AT3G01160	pre-rRNA-processing ESF1-like protein	[detail]	820504
9.1	AT3G49990	Low temperature viability protein	[detail]	824161
7.8	NFD5	pentatricopeptide (PPR) repeat-containing protein	[detail]	838538

Coexpressed
gene list

[Coexpressed gene list for AT3G02760]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258601_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258601_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258601_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820930
Refseq ID (protein)	NP_001325800.1
Refseq ID (protein)	NP_186925.4

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