functional annotation |
Function |
dicer-like 2 |
|
GO BP |
GO:0051214 [list] [network] RNA virus induced gene silencing
|
(3 genes)
|
IGI
|
|
GO:0010267 [list] [network] production of ta-siRNAs involved in RNA interference
|
(15 genes)
|
IMP
|
|
GO:0010216 [list] [network] maintenance of DNA methylation
|
(20 genes)
|
IMP
|
|
GO:0035196 [list] [network] production of miRNAs involved in gene silencing by miRNA
|
(29 genes)
|
IGI
|
|
GO:0030422 [list] [network] production of siRNA involved in RNA interference
|
(34 genes)
|
IBA
|
|
GO:0051607 [list] [network] defense response to virus
|
(44 genes)
|
IGI
|
|
|
GO CC |
|
GO MF |
GO:0004525 [list] [network] ribonuclease III activity
|
(10 genes)
|
IBA
|
|
GO:0004386 [list] [network] helicase activity
|
(157 genes)
|
IEA
|
|
GO:0003723 [list] [network] RNA binding
|
(1790 genes)
|
IEA
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
KEGG |
|
|
Protein |
NP_001078101.1
NP_001189798.1
NP_001327050.1
NP_566199.4
|
BLAST |
NP_001078101.1
NP_001189798.1
NP_001327050.1
NP_566199.4
|
Orthologous |
[Ortholog page]
LOC4333337 (osa)
LOC4346696 (osa)
LOC7462112 (ppo)
LOC7474402 (ppo)
LOC11416791 (mtr)
LOC25483869 (mtr)
LOC25501509 (mtr)
LOC100192986 (zma)
LOC100258190 (vvi)
DCL2B (gma)
LOC100796706 (gma)
DCL2A (gma)
DCL2c (sly)
DCL2d (sly)
DCL2a (sly)
DCL2b (sly)
LOC103626078 (zma)
LOC103855153 (bra)
|
Subcellular localization wolf |
plas 7,
chlo 1,
E.R. 1,
pero 1,
chlo_mito 1
|
(predict for NP_001078101.1)
|
nucl 4,
plas 2,
cyto_nucl 2,
cysk_nucl 2
|
(predict for NP_001189798.1)
|
nucl 4,
cyto 2,
plas 1,
E.R. 1,
E.R._plas 1
|
(predict for NP_001327050.1)
|
nucl 4,
plas 2,
cyto_nucl 2,
cysk_nucl 2
|
(predict for NP_566199.4)
|
|
Subcellular localization TargetP |
other 7
|
(predict for NP_001078101.1)
|
other 9
|
(predict for NP_001189798.1)
|
other 4
|
(predict for NP_001327050.1)
|
other 9
|
(predict for NP_566199.4)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with DCL2 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
7.4 |
ATM |
Serine/Threonine-kinase ATM-like protein |
[detail] |
823975 |
7.3 |
AT2G17930 |
Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein |
[detail] |
816303 |
7.3 |
AT5G61140 |
U5 small nuclear ribonucleoprotein helicase |
[detail] |
836235 |
5.7 |
AT2G42640 |
Mitogen activated protein kinase kinase kinase-like protein |
[detail] |
818864 |
5.1 |
NEK1 |
NIMA-related serine/threonine kinase 1 |
[detail] |
841893 |
4.8 |
AT2G19930 |
RNA-dependent RNA polymerase family protein |
[detail] |
816512 |
|
Coexpressed gene list |
[Coexpressed gene list for DCL2]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
258863_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
258863_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
258863_at
X axis is samples (xls file), and Y axis is log-expression.
|