[←][→] ath   AT3G03710 Gene
functional annotation
Function   polyribonucleotide nucleotidyltransferase  
GO BP
GO:0010323 [list] [network] negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway  (1 genes)  IMP  
GO:0000957 [list] [network] mitochondrial RNA catabolic process  (2 genes)  IBA  
GO:0000958 [list] [network] mitochondrial mRNA catabolic process  (2 genes)  IBA  
GO:0000965 [list] [network] mitochondrial RNA 3'-end processing  (5 genes)  IBA  
GO:0016120 [list] [network] carotene biosynthetic process  (7 genes)  IMP  
GO:0016123 [list] [network] xanthophyll biosynthetic process  (8 genes)  IMP  
GO:0031425 [list] [network] chloroplast RNA processing  (22 genes)  IMP  
GO:0000963 [list] [network] mitochondrial RNA processing  (23 genes)  IBA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (41 genes)  IMP  
GO:0008033 [list] [network] tRNA processing  (94 genes)  IEA  
GO:0006401 [list] [network] RNA catabolic process  (97 genes)  IBA IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IBA IDA ISM  
GO MF
GO:0004654 [list] [network] polyribonucleotide nucleotidyltransferase activity  (2 genes)  IBA IMP  
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IBA IMP  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_187021.2 
BLAST NP_187021.2 
Orthologous [Ortholog page] LOC4342497 (osa)  LOC7482382 (ppo)  LOC7491063 (ppo)  LOC11438450 (mtr)  LOC100265692 (vvi)  LOC100785430 (gma)  LOC101245783 (sly)  LOC103631988 (zma)  LOC103855181 (bra)  LOC103859008 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_187021.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_187021.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with RIF10 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.4 PTAC2 plastid transcriptionally active 2 [detail] 843824
10.6 emb1138 DEAD box RNA helicase (RH3) [detail] 832713
10.1 AT3G02060 DEAD/DEAH box helicase [detail] 821294
9.6 AT4G09040 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 826483
9.3 EMB2247 protein EMBRYO DEFECTIVE 2247 [detail] 831533
8.8 AT3G06980 DEA(D/H)-box RNA helicase family protein [detail] 819883
8.6 PDE327 FAD/NAD(P)-binding oxidoreductase family protein [detail] 829195
8.4 EMB2730 Ribonuclease II/R family protein [detail] 830864
8.1 EMB1270 Pentatricopeptide repeat (PPR) superfamily protein [detail] 821336
7.5 RNEE/G RNAse E/G-like protein [detail] 814965
7.5 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 818771
Coexpressed
gene list		 [Coexpressed gene list for RIF10]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259344_at
259344_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259344_at
259344_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259344_at
259344_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821181      
Refseq ID (protein) NP_187021.2 


The preparation time of this page was 0.4 [sec].