[←][→] ath   At3g03780 Gene
functional annotation
Function   methionine synthase 2  
GO BP
GO:0009086 [list] [network] methionine biosynthetic process  (14 genes)  IMP  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003871 [list] [network] 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity  (3 genes)  IEA  
GO:0008705 [list] [network] methionine synthase activity  (3 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath00450 [list] [network] Selenocompound metabolism (18 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001118564.1  NP_187028.1  NP_850507.1 
BLAST NP_001118564.1  NP_187028.1  NP_850507.1 
Orthologous [Ortholog page] LOC547643 (gma)  ATMS1 (ath)  MS3 (ath)  LOC4352832 (osa)  LOC4352833 (osa)  LOC7478605 (ppo)  LOC7482366 (ppo)  LOC7491056 (ppo)  LOC11439549 (mtr)  LOC11442193 (mtr)  LOC18098013 (ppo)  LOC25495847 (mtr)  LOC100775388 (gma)  LOC100776541 (gma)  LOC100779947 (gma)  LOC100802039 (gma)  LOC100807833 (gma)  LOC100811317 (gma)  LOC101250617 (sly)  ER69 (sly)  LOC103845623 (bra)  LOC103845887 (bra)  LOC103851137 (bra)  LOC103856274 (bra)  LOC103856476 (bra)  LOC103859011 (bra)  LOC112323225 (ppo)  LOC123087362 (tae)  LOC123090570 (tae)  LOC123095612 (tae)  LOC123102066 (tae)  LOC123110172 (tae)  LOC123119218 (tae)  LOC123397666 (hvu)  LOC123446921 (hvu) 
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_001118564.1)
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_187028.1)
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_850507.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001118564.1)
other 7,  mito 4  (predict for NP_187028.1)
other 7,  mito 4  (predict for NP_850507.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 6
ath00270 Cysteine and methionine metabolism 5
ath00940 Phenylpropanoid biosynthesis 5
ath00670 One carbon pool by folate 3
ath01200 Carbon metabolism 3
Genes directly connected with MS2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.0 ATMS1 Cobalamin-independent synthase family protein [detail] 831660
9.8 SHM4 serine hydroxymethyltransferase 4 [detail] 827027
9.5 MAT3 methionine adenosyltransferase 3 [detail] 818260
8.1 MTHFR1 methylenetetrahydrofolate reductase 1 [detail] 825167
7.7 SAHH2 S-adenosyl-l-homocysteine (SAH) hydrolase 2 [detail] 821964
Coexpressed
gene list		 [Coexpressed gene list for MS2]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 821147      
Refseq ID (protein) NP_001118564.1 
NP_187028.1 
NP_850507.1 


The preparation time of this page was 0.1 [sec].