[←][→] ath   At3g03920 Gene
functional annotation
Function   H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_566217.1 
BLAST NP_566217.1 
Orthologous [Ortholog page] AT5G18180 (ath)  LOC4350782 (osa)  LOC7489670 (ppo)  LOC18108236 (ppo)  LOC25498984 (mtr)  LOC100788981 (gma)  LOC100799823 (gma)  LOC101246000 (sly)  LOC103828224 (bra)  LOC103851163 (bra)  LOC103856285 (bra)  LOC123058638 (tae)  LOC123065747 (tae)  LOC123079348 (tae)  LOC123086038 (tae)  LOC123091807 (tae)  LOC123097243 (tae)  LOC123448556 (hvu) 
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 2,  chlo_mito 2  (predict for NP_566217.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for NP_566217.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 3
Genes directly connected with AT3G03920 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.2 FIB1 fibrillarin 1 [detail] 835323
10.1 GRP4 glycine-rich RNA-binding protein 4 [detail] 821966
9.8 STRS2 DEA(D/H)-box RNA helicase family protein [detail] 830763
4.9 AT5G49560 Putative methyltransferase family protein [detail] 835018
Coexpressed
gene list		 [Coexpressed gene list for AT3G03920]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259347_at
259347_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259347_at
259347_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259347_at
259347_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821062      
Refseq ID (protein) NP_566217.1 


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