[←][→] ath   AT3G04240 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein  
GO BP
GO:0006493 [list] [network] protein O-linked glycosylation  (10 genes)  IBA IDA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016757 [list] [network] transferase activity, transferring glycosyl groups  (644 genes)  IBA IDA ISS  
KEGG ath00514 [list] [network] Other types of O-glycan biosynthesis (13 genes)
Protein NP_001326045.1  NP_187074.1 
BLAST NP_001326045.1  NP_187074.1 
Orthologous [Ortholog page] LOC7469827 (ppo)  LOC7487728 (ppo)  LOC11431731 (mtr)  LOC100244912 (vvi)  LOC100381672 (zma)  LOC100798815 (gma)  LOC100806661 (gma)  LOC101244231 (sly)  LOC101255198 (sly)  LOC103850053 (bra)  LOC107276395 (osa)  LOC107277461 (osa) 
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001326045.1)
cyto 8,  chlo 1,  nucl 1,  cyto_mito 1  (predict for NP_187074.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326045.1)
chlo 3,  scret 3  (predict for NP_187074.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 3
ath04070 Phosphatidylinositol signaling system 2
Genes directly connected with SEC on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT2G44970 alpha/beta-Hydrolases superfamily protein [detail] 819105
6.1 MTM2 Myotubularin-like phosphatases II superfamily [detail] 830333
5.9 AT3G62240 RING/U-box superfamily protein [detail] 825397
5.4 AT3G16940 calmodulin-binding transcription activator [detail] 820950
4.3 AT5G23850 O-glucosyltransferase rumi-like protein (DUF821) [detail] 832450
Coexpressed
gene list		 [Coexpressed gene list for SEC]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258575_at
258575_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258575_at
258575_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258575_at
258575_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819579      
Refseq ID (protein) NP_001326045.1 
NP_187074.1 


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