[←][→] ath   At3g04240 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006493 [list] [network] protein O-linked glycosylation  (14 genes)  IDA  
GO:0009910 [list] [network] negative regulation of flower development  (55 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0097363 [list] [network] protein O-acetylglucosaminyltransferase activity  (2 genes)  IEA  
GO:0016757 [list] [network] glycosyltransferase activity  (567 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00514 [list] [network] Other types of O-glycan biosynthesis (13 genes)
Protein NP_001326045.1  NP_187074.1 
BLAST NP_001326045.1  NP_187074.1 
Orthologous [Ortholog page] LOC7469827 (ppo)  LOC7487728 (ppo)  LOC11431731 (mtr)  LOC100798815 (gma)  LOC100806661 (gma)  LOC101244231 (sly)  LOC101255198 (sly)  LOC103850053 (bra)  LOC107276395 (osa)  LOC107277461 (osa)  LOC123045247 (tae)  LOC123053079 (tae)  LOC123188987 (tae)  LOC123426467 (hvu) 
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001326045.1)
cyto 8,  chlo 1,  nucl 1,  cyto_mito 1  (predict for NP_187074.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326045.1)
chlo 3,  scret 3  (predict for NP_187074.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 3
ath04070 Phosphatidylinositol signaling system 2
Genes directly connected with SEC on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.5 AT2G44970 alpha/beta-Hydrolases superfamily protein [detail] 819105
6.1 AT5G22450 spectrin beta chain, brain [detail] 832306
6.0 MTM2 Myotubularin-like phosphatases II superfamily [detail] 830333
4.5 AT5G23850 O-glucosyltransferase rumi-like protein (DUF821) [detail] 832450
Coexpressed
gene list		 [Coexpressed gene list for SEC]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258575_at
258575_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258575_at
258575_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258575_at
258575_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819579      
Refseq ID (protein) NP_001326045.1 
NP_187074.1 


The preparation time of this page was 0.3 [sec].