[←][→] ath   At3g04740 Gene
functional annotation
Function   RNA polymerase II transcription mediator    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (11 genes)  IDA  
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IMP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO:0009627 [list] [network] systemic acquired resistance  (117 genes)  IEP  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (159 genes)  IDA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  ISS  
GO CC
GO:0016592 [list] [network] mediator complex  (43 genes)  IDA ISS  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (62 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_187125.1 
BLAST NP_187125.1 
Orthologous [Ortholog page] LOC4345299 (osa)  LOC4346616 (osa)  LOC7487671 (ppo)  LOC11414438 (mtr)  LOC18098970 (ppo)  LOC25499680 (mtr)  LOC100783484 (gma)  LOC100797588 (gma)  LOC101261458 (sly)  LOC103849141 (bra)  LOC123044895 (tae)  LOC123052617 (tae)  LOC123103426 (tae)  LOC123111618 (tae)  LOC123121008 (tae)  LOC123188621 (tae)  LOC123398659 (hvu)  LOC123426010 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1  (predict for NP_187125.1)
Subcellular
localization
TargetP
other 8  (predict for NP_187125.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SWP on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.6 AT5G42950 GYF domain-containing protein [detail] 834307
10.2 AT5G64270 splicing factor [detail] 836548
9.9 CCT RNA polymerase II transcription mediator [detail] 827954
9.6 AT4G02480 AAA-type ATPase family protein [detail] 827979
8.9 CER9 RING/U-box superfamily protein [detail] 829556
6.7 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family protein [detail] 821872
Coexpressed
gene list		 [Coexpressed gene list for SWP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258844_at
258844_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258844_at
258844_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258844_at
258844_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819634      
Refseq ID (protein) NP_187125.1 


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