[←][→] ath   At3g05060 Gene
functional annotation
Function   NOP56-like pre RNA processing ribonucleoprotein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_187157.1 
BLAST NP_187157.1 
Orthologous [Ortholog page] AT5G27120 (ath)  LOC4332840 (osa)  LOC4332841 (osa)  LOC7473909 (ppo)  LOC11436777 (mtr)  LOC11437645 (mtr)  LOC18098893 (ppo)  LOC100775301 (gma)  LOC100784721 (gma)  LOC101255995 (sly)  LOC101263757 (sly)  LOC103837322 (bra)  LOC103854646 (bra)  LOC103874558 (bra)  LOC123051654 (tae)  LOC123142823 (tae)  LOC123187584 (tae)  LOC123424804 (hvu)  LOC123448571 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_187157.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for NP_187157.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
Genes directly connected with AT3G05060 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
21.6 NOP56 NOP56-like pre RNA processing ribonucleoprotein [detail] 842063
20.2 NAP57 homologue of NAP57 [detail] 824882
16.0 AT5G27120 NOP56-like pre RNA processing ribonucleoprotein [detail] 832770
13.5 NSN1 GTP-binding family protein [detail] 819890
13.0 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein [detail] 820468
12.5 PPAN PETER PAN-like protein [detail] 836299
12.1 ATG2 metallopeptidase M24 family protein [detail] 824343
11.1 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family protein [detail] 818377
9.6 La1 La protein 1 [detail] 829408
9.4 STRS1 DEA(D/H)-box RNA helicase family protein [detail] 840087
Coexpressed
gene list		 [Coexpressed gene list for AT3G05060]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259311_at
259311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259311_at
259311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259311_at
259311_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819668      
Refseq ID (protein) NP_187157.1 


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