[←][→] ath   AT3G05200 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0009816 [list] [network] defense response to bacterium, incompatible interaction  (43 genes)  IMP  
GO:0010200 [list] [network] response to chitin  (142 genes)  IEP  
GO:0009814 [list] [network] defense response, incompatible interaction  (174 genes)  IEP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_566249.1 
BLAST NP_566249.1 
Orthologous [Ortholog page] CNI1 (ath)  ATL15 (ath)  AT1G72200 (ath)  LOC7473303 (ppo)  LOC7486572 (ppo)  LOC9269620 (osa)  LOC11412074 (mtr)  LOC11419970 (mtr)  LOC11427383 (mtr)  LOC11434183 (mtr)  LOC100192844 (zma)  LOC100242654 (vvi)  LOC100259131 (vvi)  LOC100274267 (zma)  LOC100781706 (gma)  LOC100783688 (gma)  LOC100783823 (gma)  LOC100805815 (gma)  LOC100807828 (gma)  LOC100810865 (gma)  LOC100815936 (gma)  LOC100815982 (gma)  LOC101244662 (sly)  LOC101250098 (sly)  LOC101259581 (sly)  LOC101265719 (sly)  LOC103632881 (zma)  LOC103829846 (bra)  LOC103830801 (bra)  LOC103837184 (bra)  LOC103847805 (bra)  LOC103848994 (bra)  LOC103852760 (bra)  LOC103853375 (bra)  LOC103854656 (bra)  LOC103859080 (bra)  LOC103870845 (bra)  LOC103874829 (bra)  LOC104877822 (vvi) 
Subcellular
localization
wolf
chlo 4,  plas 3,  E.R. 1,  nucl_plas 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_566249.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_566249.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with ATL6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 ATL2 TOXICOS EN LEVADURA 2 [detail] 820924
7.0 MKS1 MAP kinase substrate 1 [detail] 821400
6.8 CNI1 carbon/nitrogen insensitive 1 [detail] 832801
4.8 At17.1 plastid movement impaired protein [detail] 814662
4.6 AT1G62422 hypothetical protein [detail] 5007832
Coexpressed
gene list		 [Coexpressed gene list for ATL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259312_at
259312_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259312_at
259312_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259312_at
259312_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819684      
Refseq ID (protein) NP_566249.1 


The preparation time of this page was 0.2 [sec].