[←][→] ath   At3g05200 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
KEGG
Protein NP_566249.1 
BLAST NP_566249.1 
Orthologous [Ortholog page] AT4G09100 (ath)  AT4G40070 (ath)  CNI1 (ath)  ATL15 (ath)  AT1G72200 (ath)  LOC4345870 (osa)  LOC7473303 (ppo)  LOC7486572 (ppo)  LOC9269620 (osa)  LOC11412074 (mtr)  LOC11419970 (mtr)  LOC11427383 (mtr)  LOC11434183 (mtr)  LOC18098812 (ppo)  LOC100781706 (gma)  LOC100783688 (gma)  LOC100783823 (gma)  LOC100805815 (gma)  LOC100807828 (gma)  LOC100810865 (gma)  LOC100815936 (gma)  LOC100815982 (gma)  LOC101244662 (sly)  LOC101250098 (sly)  LOC101259581 (sly)  LOC101265719 (sly)  LOC103829846 (bra)  LOC103830801 (bra)  LOC103835079 (bra)  LOC103837184 (bra)  LOC103847805 (bra)  LOC103848994 (bra)  LOC103852760 (bra)  LOC103853375 (bra)  LOC103854656 (bra)  LOC103859080 (bra)  LOC103870845 (bra)  LOC103874829 (bra)  LOC123075702 (tae)  LOC123107184 (tae)  LOC123116314 (tae)  LOC123124941 (tae)  LOC123132279 (tae)  LOC123133834 (tae)  LOC123141220 (tae)  LOC123396692 (hvu)  LOC123403706 (hvu) 
Subcellular
localization
wolf
chlo 4,  plas 3,  E.R. 1,  nucl_plas 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_566249.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_566249.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATL6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.4 ATL2 TOXICOS EN LEVADURA 2 [detail] 820924
7.2 AT1G23710 hypothetical protein (DUF1645) [detail] 838981
6.9 RDUF2 zinc finger (C3HC4-type RING finger) family protein [detail] 836074
5.2 AT1G62422 uncharacterized protein [detail] 5007832
Coexpressed
gene list		 [Coexpressed gene list for ATL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259312_at
259312_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259312_at
259312_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259312_at
259312_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819684      
Refseq ID (protein) NP_566249.1 


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