[][] ath   At3g05500 Gene
functional annotation
Function   Rubber elongation factor protein (REF)
GO BP
GO:0034389 [list] [network] lipid droplet organization  (11 genes)  IMP  
GO:0080186 [list] [network] developmental vegetative growth  (11 genes)  IMP  
GO:0019915 [list] [network] lipid storage  (13 genes)  IDA  
GO:1902584 [list] [network] positive regulation of response to water deprivation  (17 genes)  IMP  
GO:0045927 [list] [network] positive regulation of growth  (41 genes)  IMP  
GO CC
GO:0005811 [list] [network] lipid droplet  (44 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001326093.1  NP_187201.1 
BLAST NP_001326093.1  NP_187201.1 
Orthologous [Ortholog page] AT2G47780 (ath)LOC4337833 (osa)LOC4344249 (osa)LOC7478834 (ppo)LOC7481735 (ppo)LOC11423939 (mtr)LOC18098673 (ppo)LOC100527222 (gma)LOC100808646 (gma)LOC101250630 (sly)LOC101253428 (sly)LOC103848941 (bra)LOC103866345 (bra)LOC103870817 (bra)LOC123112926 (tae)LOC123156165 (tae)LOC123180536 (tae)LOC123191454 (tae)LOC123425585 (hvu)
Subcellular
localization
wolf
nucl 4,  chlo 1,  mito 1,  chlo_mito 1,  E.R._plas 1,  plas 1,  E.R. 1  (predict for NP_001326093.1)
cyto 5,  mito 2,  chlo 1,  mito_plas 1  (predict for NP_187201.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_001326093.1)
other 8  (predict for NP_187201.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT3G05500 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 AT2G37110 PLAC8 family protein [detail] 818287
6.0 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesi [detail] 831958
5.4 BTI1 VIRB2-interacting protein 1 [detail] 828463
5.3 AT5G61390 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 836260
Coexpressed
gene list
[Coexpressed gene list for AT3G05500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259105_at
259105_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259105_at
259105_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
259105_at
259105_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 819715    
Refseq ID (protein) NP_001326093.1 
NP_187201.1 


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