[←][→] ath   AT3G05500 Gene
functional annotation
Function   Rubber elongation factor protein (REF)  
GO BP
GO:0034389 [list] [network] lipid droplet organization  (10 genes)  IMP  
GO:0080186 [list] [network] developmental vegetative growth  (10 genes)  IMP  
GO:1902584 [list] [network] positive regulation of response to water deprivation  (11 genes)  IMP  
GO:0019915 [list] [network] lipid storage  (22 genes)  IDA  
GO:0045927 [list] [network] positive regulation of growth  (35 genes)  IMP  
GO CC
GO:0005811 [list] [network] lipid droplet  (46 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001326093.1  NP_187201.1 
BLAST NP_001326093.1  NP_187201.1 
Orthologous [Ortholog page] AT2G47780 (ath)  LOC4337833 (osa)  LOC4344249 (osa)  LOC7478834 (ppo)  LOC11423939 (mtr)  LOC100240929 (vvi)  LOC100251998 (vvi)  LOC100279884 (zma)  LOC100283461 (zma)  LOC100527222 (gma)  LOC100808646 (gma)  LOC101250630 (sly)  LOC101253428 (sly)  LOC103848941 (bra)  LOC103866345 (bra)  LOC103870817 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 1,  mito 1,  chlo_mito 1,  E.R._plas 1,  plas 1,  E.R. 1  (predict for NP_001326093.1)
cyto 5,  mito 2,  chlo 1,  mito_plas 1  (predict for NP_187201.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_001326093.1)
other 8  (predict for NP_187201.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT3G05500 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT2G37110 PLAC8 family protein [detail] 818287
5.2 BTI1 VIRB2-interacting protein 1 [detail] 828463
5.0 RPT1A regulatory particle triple-A 1A [detail] 841812
Coexpressed
gene list		 [Coexpressed gene list for AT3G05500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259105_at
259105_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259105_at
259105_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259105_at
259105_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819715      
Refseq ID (protein) NP_001326093.1 
NP_187201.1 


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