[←][→] ath   At3g05560 Gene
functional annotation
Function   Ribosomal L22e protein family  
GO BP
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001078112.1  NP_187207.1  NP_974229.1 
BLAST NP_001078112.1  NP_187207.1  NP_974229.1 
Orthologous [Ortholog page] AT5G27770 (ath)  LOC4332802 (osa)  LOC4344261 (osa)  LOC7455994 (ppo)  LOC7475906 (ppo)  LOC7481725 (ppo)  LOC7487786 (ppo)  LOC11412472 (mtr)  LOC11426422 (mtr)  LOC11429584 (mtr)  LOC18098657 (ppo)  LOC100305544 (gma)  LOC100305556 (gma)  LOC100499714 (gma)  LOC100499952 (gma)  LOC100500073 (gma)  LOC100790071 (gma)  LOC101245494 (sly)  LOC101245794 (sly)  LOC101258008 (sly)  LOC103849917 (bra)  LOC103859100 (bra)  LOC103870812 (bra)  LOC103874512 (bra)  LOC123043723 (tae)  LOC123147889 (tae)  LOC123158034 (tae)  LOC123170475 (tae)  LOC123409688 (hvu)  LOC123424745 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  cysk_nucl 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001078112.1)
cyto 6,  nucl 2,  cysk_nucl 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_187207.1)
cyto 6,  nucl 2,  cysk_nucl 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_974229.1)
Subcellular
localization
TargetP
other 7,  mito 3,  scret 3  (predict for NP_001078112.1)
other 7,  mito 3,  scret 3  (predict for NP_187207.1)
other 7,  mito 3,  scret 3  (predict for NP_974229.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with AT3G05560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.1 RPL24A ribosomal protein L24 [detail] 818234
15.2 AT1G26880 Ribosomal protein L34e superfamily protein [detail] 838331
15.1 AT3G53430 Ribosomal protein L11 family protein [detail] 824511
12.8 NDPK1 nucleoside diphosphate kinase [detail] 826515
Coexpressed
gene list		 [Coexpressed gene list for AT3G05560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259112_at
259112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259112_at
259112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259112_at
259112_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819722      
Refseq ID (protein) NP_001078112.1 
NP_187207.1 
NP_974229.1 


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