[←][→] ath   At3g05670 Gene
functional annotation
Function   RING/U-box protein      
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IEA  
GO:0051173 [list] [network] positive regulation of nitrogen compound metabolic process  (427 genes)  IEA  
GO:0031325 [list] [network] positive regulation of cellular metabolic process  (487 genes)  IEA  
GO:2000241 [list] [network] regulation of reproductive process  (507 genes)  IEA  
GO:0071396 [list] [network] cellular response to lipid  (522 genes)  IEA  
GO:0009755 [list] [network] hormone-mediated signaling pathway  (904 genes)  IEA  
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001325507.1  NP_001325508.1  NP_187218.1 
BLAST NP_001325507.1  NP_001325508.1  NP_187218.1 
Orthologous [Ortholog page] LOC4332581 (osa)  LOC4344365 (osa)  LOC7481708 (ppo)  LOC11431298 (mtr)  LOC18098623 (ppo)  LOC100791422 (gma)  LOC100797448 (gma)  LOC101264764 (sly)  LOC103859105 (bra)  LOC103870797 (bra)  LOC123043581 (tae)  LOC123051452 (tae)  LOC123085641 (tae)  LOC123092385 (tae)  LOC123097704 (tae)  LOC123187393 (tae)  LOC123424637 (hvu)  LOC123448849 (hvu) 
Subcellular
localization
wolf
nucl 6,  mito 1,  chlo 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001325507.1)
nucl 6,  mito 1,  chlo 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001325508.1)
nucl 6,  mito 1,  chlo 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_187218.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001325507.1)
other 5,  mito 4  (predict for NP_001325508.1)
other 5,  mito 4  (predict for NP_187218.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT3G05670 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT5G43560 TRAF-like superfamily protein [detail] 834376
7.7 AT2G44200 pre-mRNA splicing factor domain-containing protein [detail] 819028
7.4 AT5G53440 LOW protein: zinc finger CCCH domain protein [detail] 835425
6.8 AT5G55040 DNA-binding bromodomain-containing protein [detail] 835595
5.2 XLG3 extra-large GTP-binding protein 3 [detail] 840083
Coexpressed
gene list		 [Coexpressed gene list for AT3G05670]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258892_at
258892_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258892_at
258892_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258892_at
258892_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819734      
Refseq ID (protein) NP_001325507.1 
NP_001325508.1 
NP_187218.1 


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