[←][→] ath   AT3G05740 Gene
functional annotation
Function   RECQ helicase l1  
GO BP
GO:0006268 [list] [network] DNA unwinding involved in DNA replication  (18 genes)  IBA  
GO:0032508 [list] [network] DNA duplex unwinding  (29 genes)  IBA  
GO:0042631 [list] [network] cellular response to water deprivation  (35 genes)  IEP  
GO:0070417 [list] [network] cellular response to cold  (37 genes)  IEP  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IBA  
GO:0006310 [list] [network] DNA recombination  (143 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA  
GO CC
GO:0005694 [list] [network] chromosome  (348 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (7 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_001327100.1  NP_187225.2 
BLAST NP_001327100.1  NP_187225.2 
Orthologous [Ortholog page] LOC4351098 (osa)  LOC11408014 (mtr)  LOC100252922 (vvi)  LOC100806070 (gma)  LOC101268516 (sly)  LOC103652713 (zma)  LOC103870802 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001327100.1)
nucl 9,  E.R. 1  (predict for NP_187225.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001327100.1)
other 8  (predict for NP_187225.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
ath03420 Nucleotide excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 4
ath03410 Base excision repair 2
Genes directly connected with RECQI1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.5 POLA2 DNA polymerase alpha 2 [detail] 843086
14.4 ETG1 E2F target protein 1 (ETG1) [detail] 818650
14.4 POLA3 DNA primase POLA3 [detail] 834193
12.1 AT3G12170 Chaperone DnaJ-domain superfamily protein [detail] 820394
10.9 SLD5 DNA replication protein-like protein [detail] 834960
8.9 CDC6 cell division control 6 [detail] 817518
8.1 AT5G25580 hypothetical protein [detail] 832633
7.8 AT5G02520 dentin sialophosphoprotein-like protein [detail] 831892
Coexpressed
gene list		 [Coexpressed gene list for RECQI1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258898_at
258898_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258898_at
258898_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258898_at
258898_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819743      
Refseq ID (protein) NP_001327100.1 
NP_187225.2 


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