ATTED-II : GeneID search result

[←][→] ath AT3G06140 Gene

functional annotation

Function

RING/U-box superfamily protein

GO BP

GO:0016567 [list] [network] protein ubiquitination

(624 genes)

IBA IDA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity	(204 genes)	IBA
GO:0004842 [list] [network] ubiquitin-protein transferase activity	(434 genes)	IDA

KEGG

Protein

NP_566274.1

BLAST

NP_566274.1

Orthologous

[Ortholog page] LUL3 (ath) LOC7454248 (ppo) LOC9266835 (osa) LOC25486085 (mtr) LOC25494002 (mtr) LOC100266660 (vvi) LOC100786054 (gma) LOC100808808 (gma) LOC100852866 (vvi) LOC101055522 (sly) LOC101260179 (sly) LOC102665712 (gma) LOC103630329 (zma) LOC103845786 (bra) LOC103854457 (bra)

Subcellular
localization
wolf

mito 4, nucl 4, cyto_mito 3

(predict for NP_566274.1)

Subcellular
localization
TargetP

mito 6, other 3

(predict for NP_566274.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with LUL4 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.5	AT3G08680	Leucine-rich repeat protein kinase family protein	[detail]	820015
6.0	PERK14	Protein kinase superfamily protein	[detail]	3770575
6.0	AT5G40150	Peroxidase superfamily protein	[detail]	834012
5.3	SCO3	SNOWY COTYLEDON protein (DUF566)	[detail]	821494

Coexpressed
gene list

[Coexpressed gene list for LUL4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256400_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256400_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256400_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	819787
Refseq ID (protein)	NP_566274.1

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