[←][→] ath   At3g06290 Gene
functional annotation
Function   SAC3/GANP/Nin1/mts3/eIF-3 p25 family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0044030 [list] [network] regulation of DNA methylation  (19 genes)  IMP  
GO CC
GO:0034399 [list] [network] nuclear periphery  (11 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001327776.1  NP_001327777.1  NP_001327778.1  NP_187280.3 
BLAST NP_001327776.1  NP_001327777.1  NP_001327778.1  NP_187280.3 
Orthologous [Ortholog page] LOC7497995 (ppo)  LOC11441873 (mtr)  LOC100777150 (gma)  LOC100817727 (gma)  LOC101253869 (sly)  LOC103854469 (bra)  LOC103859148 (bra)  LOC107278765 (osa)  LOC123043976 (tae)  LOC123051849 (tae)  LOC123187736 (tae)  LOC123425021 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001327776.1)
chlo 6,  nucl 2,  mito 1,  cysk_nucl 1  (predict for NP_001327777.1)
nucl 6,  cyto 2,  chlo 1,  vacu 1,  cysk 1  (predict for NP_001327778.1)
chlo 5,  nucl 3,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for NP_187280.3)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001327776.1)
chlo 5  (predict for NP_001327777.1)
other 8  (predict for NP_001327778.1)
other 5,  mito 3  (predict for NP_187280.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with SAC3B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.9 INO80 DNA helicase INO80-like protein [detail] 824897
8.6 AT1G53780 26S proteasome regulatory complex ATPase [detail] 841815
8.1 SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family [detail] 818519
7.2 AT2G40770 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [detail] 818674
6.3 AT3G13225 WW domain-containing protein [detail] 820517
5.8 AT2G35920 RNA helicase family protein [detail] 818165
Coexpressed
gene list		 [Coexpressed gene list for SAC3B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256394_at
256394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256394_at
256394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256394_at
256394_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819803      
Refseq ID (protein) NP_001327776.1 
NP_001327777.1 
NP_001327778.1 
NP_187280.3 


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