[←][→] ath   AT3G06950 Gene
functional annotation
Function   Pseudouridine synthase family protein  
GO BP
GO:0031119 [list] [network] tRNA pseudouridine synthesis  (5 genes)  IBA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0106029 [list] [network] tRNA pseudouridine synthase activity  (2 genes)  IEA  
GO:0009982 [list] [network] pseudouridine synthase activity  (20 genes)  IBA TAS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_187351.2 
BLAST NP_187351.2 
Orthologous [Ortholog page] LOC7481646 (ppo)  LOC9267107 (osa)  LOC11419568 (mtr)  LOC100217116 (zma)  LOC100254503 (vvi)  LOC100775575 (gma)  LOC100801367 (gma)  LOC101244488 (sly)  LOC103859192 (bra) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_187351.2)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_187351.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
Genes directly connected with AT3G06950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein [detail] 829958
7.6 AT3G29185 glutamate NMDA receptor subunit epsilon-1, putative (DUF3598) [detail] 822570
7.0 AT3G19810 BTB/POZ domain protein, putative (DUF177) [detail] 821518
6.8 AT5G16140 Peptidyl-tRNA hydrolase family protein [detail] 831471
6.4 AT5G15802 chaperone [detail] 831437
Coexpressed
gene list		 [Coexpressed gene list for AT3G06950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258538_at
258538_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258538_at
258538_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258538_at
258538_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819880      
Refseq ID (protein) NP_187351.2 


The preparation time of this page was 0.2 [sec].