[←][→] ath   At3g06950 Gene
functional annotation
Function   Pseudouridine synthase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IEA ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (19 genes)  TAS  
KEGG
Protein NP_187351.2 
BLAST NP_187351.2 
Orthologous [Ortholog page] LOC7481646 (ppo)  LOC9267107 (osa)  LOC11419568 (mtr)  LOC100775575 (gma)  LOC100801367 (gma)  LOC101244488 (sly)  LOC103859192 (bra)  LOC123043153 (tae)  LOC123180737 (tae)  LOC123428147 (hvu) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_187351.2)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_187351.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G06950 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein [detail] 829958
7.7 AT1G77122 Uncharacterized protein family UPF0090 [detail] 844048
7.7 AT3G19810 BTB/POZ domain protein, putative (DUF177) [detail] 821518
7.2 NUDX27 nudix hydrolase homolog 27 [detail] 830522
7.0 AT5G15802 chaperone [detail] 831437
6.4 AT5G16140 Peptidyl-tRNA hydrolase family protein [detail] 831471
6.0 AT3G18870 Mitochondrial transcription termination factor family protein [detail] 821420
Coexpressed
gene list		 [Coexpressed gene list for AT3G06950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258538_at
258538_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258538_at
258538_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258538_at
258538_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819880      
Refseq ID (protein) NP_187351.2 


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