[←][→] ath   At3g06980 Gene
functional annotation
Function   DEA(D/H)-box RNA helicase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006968 [list] [network] cellular defense response  (2 genes)  ISS  
GO:0006397 [list] [network] mRNA processing  (183 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (191 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (45 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_187354.1 
BLAST NP_187354.1 
Orthologous [Ortholog page] LOC4331339 (osa)  LOC7496495 (ppo)  LOC11414319 (mtr)  LOC100780849 (gma)  LOC100784377 (gma)  LOC101257432 (sly)  LOC103870712 (bra)  LOC123072636 (tae)  LOC123099202 (tae)  LOC123106166 (tae)  LOC123450053 (hvu) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_187354.1)
Subcellular
localization
TargetP
chlo 4,  other 3,  mito 3  (predict for NP_187354.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G06980 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.6 RIF10 polyribonucleotide nucleotidyltransferase [detail] 821181
9.3 PDE327 FAD/NAD(P)-binding oxidoreductase family protein [detail] 829195
9.3 PTAC3 plastid transcriptionally active 3 [detail] 819581
8.6 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839577
8.4 TOC159 translocon at the outer envelope membrane of chloroplasts 159 [detail] 827934
Coexpressed
gene list		 [Coexpressed gene list for AT3G06980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258554_at
258554_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258554_at
258554_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258554_at
258554_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819883      
Refseq ID (protein) NP_187354.1 


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