[←][→] ath   At3g07970 Gene
functional annotation
Function   Pectin lyase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009830 [list] [network] cell wall modification involved in abscission  (3 genes)  TAS  
GO:0010047 [list] [network] fruit dehiscence  (13 genes)  IMP  
GO:0009901 [list] [network] anther dehiscence  (21 genes)  IMP  
GO:0048235 [list] [network] pollen sperm cell differentiation  (35 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (78 genes)  IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IDA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (108 genes)
Protein NP_187454.2 
BLAST NP_187454.2 
Orthologous [Ortholog page] PG2 (sly)  PG11 (gma)  PGAZAT (ath)  ADPG1 (ath)  LOC4334514 (osa)  LOC4342698 (osa)  LOC7468975 (ppo)  LOC7473629 (ppo)  LOC7482285 (ppo)  LOC11438271 (mtr)  LOC11444474 (mtr)  LOC25483385 (mtr)  LOC25499040 (mtr)  LOC100777940 (gma)  LOC100782758 (gma)  LOC100796446 (gma)  LOC100797601 (gma)  LOC100799134 (gma)  LOC100816917 (gma)  PS-2 (sly)  LOC101263946 (sly)  LOC103830105 (bra)  LOC103841655 (bra)  LOC103859255 (bra)  LOC103865908 (bra)  LOC103866594 (bra)  LOC103870621 (bra)  LOC107275419 (osa)  LOC107276148 (osa)  LOC107278493 (osa)  LOC112936116 (osa)  LOC123041593 (tae)  LOC123108127 (tae)  LOC123108128 (tae)  LOC123115427 (tae)  LOC123117343 (tae)  LOC123117345 (tae)  LOC123117346 (tae)  LOC123125869 (tae)  LOC123125870 (tae)  LOC123153154 (tae)  LOC123156557 (tae)  LOC123164045 (tae)  LOC123399063 (hvu)  LOC123399289 (hvu)  LOC123408312 (hvu) 
Subcellular
localization
wolf
extr 4,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_187454.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_187454.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with QRT2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT5G20860 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 832209
8.3 ABCG23 ABC-2 type transporter family protein [detail] 832061
8.3 AT5G37690 SGNH hydrolase-type esterase superfamily protein [detail] 833748
4.7 AT3G54310 DNA-directed RNA polymerase subunit alpha [detail] 824598
Coexpressed
gene list		 [Coexpressed gene list for QRT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258631_at
258631_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258631_at
258631_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258631_at
258631_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819988      
Refseq ID (protein) NP_187454.2 


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