[←][→] ath   At3g08030 Gene
functional annotation
Function   DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0071407 [list] [network] cellular response to organic cyclic compound  (250 genes)  IEA  
GO:0010243 [list] [network] response to organonitrogen compound  (591 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (16 genes)  IDA  
GO:0099503 [list] [network] secretory vesicle  (171 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_566328.1  NP_974254.1 
BLAST NP_566328.1  NP_974254.1 
Orthologous [Ortholog page] AT2G41800 (ath)  AT2G41810 (ath)  LOC4334511 (osa)  LOC7473615 (ppo)  LOC7480067 (ppo)  LOC7482294 (ppo)  LOC7484016 (ppo)  LOC7496132 (ppo)  LOC11441906 (mtr)  LOC11446162 (mtr)  LOC11446164 (mtr)  LOC25479953 (mtr)  LOC100796094 (gma)  LOC100804119 (gma)  LOC100812299 (gma)  LOC101245049 (sly)  LOC101245348 (sly)  LOC101251618 (sly)  LOC103848900 (bra)  LOC103865900 (bra)  LOC103866588 (bra)  LOC103866589 (bra)  LOC103870618 (bra)  LOC123105547 (tae)  LOC123113854 (tae)  LOC123123360 (tae)  LOC123452880 (hvu) 
Subcellular
localization
wolf
extr 6,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_566328.1)
cyto 8,  pero 1  (predict for NP_974254.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_566328.1)
other 8  (predict for NP_974254.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT3G08030 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 DGR2 transmembrane protein, putative (Protein of unknown function, DUF642) [detail] 832620
6.2 AT5G12940 Leucine-rich repeat (LRR) family protein [detail] 831134
5.7 XTH19 xyloglucan endotransglucosylase/hydrolase 19 [detail] 829152
Coexpressed
gene list		 [Coexpressed gene list for AT3G08030]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258641_at
258641_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258641_at
258641_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258641_at
258641_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819994      
Refseq ID (protein) NP_566328.1 
NP_974254.1 


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