[←][→] ath   At3g08960 Gene
functional annotation
Function   ARM repeat superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0015031 [list] [network] protein transport  (265 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0031267 [list] [network] small GTPase binding  (18 genes)  IEA  
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (103 genes)
Protein NP_001319503.1  NP_001326132.1  NP_187508.5 
BLAST NP_001319503.1  NP_001326132.1  NP_187508.5 
Orthologous [Ortholog page] LOC4344385 (osa)  LOC7460368 (ppo)  LOC9271256 (osa)  LOC11412327 (mtr)  LOC100780767 (gma)  LOC100785151 (gma)  LOC101256320 (sly)  LOC103859319 (bra)  LOC103870574 (bra)  LOC123043535 (tae)  LOC123051401 (tae)  LOC123187348 (tae)  LOC123424604 (hvu) 
Subcellular
localization
wolf
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001319503.1)
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001326132.1)
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_187508.5)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001319503.1)
chlo 4  (predict for NP_001326132.1)
chlo 4  (predict for NP_187508.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
Genes directly connected with AT3G08960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT3G27325 hydrolases, acting on ester bond [detail] 822352
9.0 SEC5B Exocyst complex component SEC5 [detail] 838713
8.9 AT2G27900 coiled-coil protein [detail] 817335
8.1 TRN1 transportin 1 [detail] 816198
7.4 ACD5 Diacylglycerol kinase family protein [detail] 835203
6.7 AT5G08440 uncharacterized protein [detail] 830743
Coexpressed
gene list		 [Coexpressed gene list for AT3G08960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258985_at
258985_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258985_at
258985_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258985_at
258985_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820048      
Refseq ID (protein) NP_001319503.1 
NP_001326132.1 
NP_187508.5 


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