[←][→] ath   At3g09150 Gene
functional annotation
Function   phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)      
GO BP
GO:0010024 [list] [network] phytochromobilin biosynthetic process  (3 genes)  IEA NAS  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (9 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0050619 [list] [network] phytochromobilin:ferredoxin oxidoreductase activity  (1 genes)  IDA  
GO:0016636 [list] [network] oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor  (2 genes)  IEA  
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  IEA  
KEGG ath00860 [list] [network] Porphyrin metabolism (53 genes)
Protein NP_001326171.1  NP_566344.2  NP_850996.1  NP_974264.1 
BLAST NP_001326171.1  NP_566344.2  NP_850996.1  NP_974264.1 
Orthologous [Ortholog page] AUREA (sly)  LOC4325761 (osa)  LOC7467396 (ppo)  LOC7478520 (ppo)  LOC11434871 (mtr)  LOC100791053 (gma)  LOC103859309 (bra)  LOC103870559 (bra)  LOC123059393 (tae)  LOC123066605 (tae)  LOC123075631 (tae)  LOC123445491 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001326171.1)
chlo 9,  nucl 1,  mito 1  (predict for NP_566344.2)
chlo 9,  nucl 1,  mito 1  (predict for NP_850996.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  extr 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_974264.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326171.1)
chlo 9  (predict for NP_566344.2)
chlo 8  (predict for NP_850996.1)
other 5,  mito 3  (predict for NP_974264.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HY2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 EMB2453 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830116
6.9 AT4G37920 endoribonuclease E-like protein [detail] 829948
6.8 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 825073
Coexpressed
gene list		 [Coexpressed gene list for HY2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259210_at
259210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259210_at
259210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259210_at
259210_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820069      
Refseq ID (protein) NP_001326171.1 
NP_566344.2 
NP_850996.1 
NP_974264.1 


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