[←][→] ath   AT3G09150 Gene
functional annotation
Function   phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)  
GO BP
GO:0010024 [list] [network] phytochromobilin biosynthetic process  (3 genes)  IEA NAS  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (9 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0050619 [list] [network] phytochromobilin:ferredoxin oxidoreductase activity  (1 genes)  IDA  
GO:0050897 [list] [network] cobalt ion binding  (51 genes)  IEA  
KEGG ath00860 [list] [network] Porphyrin and chlorophyll metabolism (53 genes)
Protein NP_001326171.1  NP_566344.2  NP_850996.1  NP_974264.1 
BLAST NP_001326171.1  NP_566344.2  NP_850996.1  NP_974264.1 
Orthologous [Ortholog page] LOC542164 (zma)  AUREA (sly)  LOC4325761 (osa)  LOC11434871 (mtr)  LOC100267105 (vvi)  LOC100791053 (gma)  LOC103859309 (bra)  LOC103870559 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001326171.1)
chlo 9,  nucl 1,  mito 1  (predict for NP_566344.2)
chlo 9,  nucl 1,  mito 1  (predict for NP_850996.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  extr 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_974264.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326171.1)
chlo 9  (predict for NP_566344.2)
chlo 8  (predict for NP_850996.1)
other 5,  mito 3  (predict for NP_974264.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with HY2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT4G37920 endoribonuclease E-like protein [detail] 829948
7.7 AT1G77122 Uncharacterized protein family UPF0090 [detail] 844048
7.6 AT5G14460 Pseudouridine synthase family protein [detail] 831297
6.1 RECA3 RECA homolog 3 [detail] 820177
4.7 AT3G20270 lipid-binding serum glycoprotein family protein [detail] 821571
Coexpressed
gene list		 [Coexpressed gene list for HY2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259210_at
259210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259210_at
259210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259210_at
259210_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820069      
Refseq ID (protein) NP_001326171.1 
NP_566344.2 
NP_850996.1 
NP_974264.1 


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