[←][→] ath   AT3G09200 Gene
functional annotation
Function   Ribosomal protein L10 family protein  
GO BP
GO:0010043 [list] [network] response to zinc ion  (42 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO CC
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_001078125.1  NP_187531.1 
BLAST NP_001078125.1  NP_187531.1 
Orthologous [Ortholog page] LOC542454 (zma)  LOC547816 (gma)  AT2G40010 (ath)  AT3G11250 (ath)  LOC4344590 (osa)  LOC7474450 (ppo)  LOC7488011 (ppo)  LOC9266027 (osa)  LOC9270965 (osa)  LOC11406082 (mtr)  LOC11436630 (mtr)  LOC100250067 (vvi)  LOC100254737 (vvi)  LOC100273601 (zma)  LOC100777482 (gma)  LOC100791968 (gma)  LOC101258269 (sly)  LOC101261521 (sly)  LOC101268804 (sly)  LOC103848258 (bra)  LOC103857896 (bra)  LOC103859308 (bra)  LOC103870557 (bra) 
Subcellular
localization
wolf
cyto 4,  pero 3,  chlo 1,  nucl 1,  mito 1  (predict for NP_001078125.1)
cyto 5,  pero 3,  chlo 1  (predict for NP_187531.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078125.1)
other 6,  scret 4  (predict for NP_187531.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
ath03013 RNA transport 5
ath03015 mRNA surveillance pathway 2
ath03018 RNA degradation 2
Genes directly connected with AT3G09200 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.5 P40 40s ribosomal protein SA [detail] 843569
15.2 ATARCA Transducin/WD40 repeat-like superfamily protein [detail] 838388
14.8 AT5G60390 GTP binding Elongation factor Tu family protein [detail] 836161
10.5 PAB4 poly(A) binding protein 4 [detail] 816867
4.9 AT2G40010 Ribosomal protein L10 family protein [detail] 818589
Coexpressed
gene list		 [Coexpressed gene list for AT3G09200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259006_at
259006_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259006_at
259006_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259006_at
259006_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820076      
Refseq ID (protein) NP_001078125.1 
NP_187531.1 


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