[][] ath   AT3G09630 Gene
functional annotation
Function   Ribosomal protein L4/L1 family
GO BP
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (136 genes)  IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_001030663.1  NP_187574.1 
BLAST NP_001030663.1  NP_187574.1 
Orthologous [Ortholog page] AT5G02870 (ath)LOC4342563 (osa)LOC7465290 (ppo)LOC9272589 (osa)LOC11406297 (mtr)LOC11425489 (mtr)LOC25484054 (mtr)LOC100191314 (zma)LOC100191607 (zma)LOC100251826 (vvi)LOC100255110 (vvi)LOC100280657 (zma)LOC100382075 (zma)LOC100779764 (gma)LOC100786828 (gma)LOC101253039 (sly)LOC101253641 (sly)LOC101259570 (sly)LOC103847417 (bra)LOC103848052 (bra)LOC103855502 (bra)LOC103859287 (bra)LOC103870529 (bra)
Subcellular
localization
wolf
chlo 4,  chlo_mito 3,  cyto 2,  cyto_nucl 1,  mito 1  (predict for NP_001030663.1)
chlo 4,  chlo_mito 3,  cyto 2,  cyto_nucl 1,  mito 1  (predict for NP_187574.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001030663.1)
other 7  (predict for NP_187574.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
ath03013 RNA transport 5
Genes directly connected with AT3G09630 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
16.1 ATARCA Transducin/WD40 repeat-like superfamily protein [detail] 838388
15.8 AT5G02870 Ribosomal protein L4/L1 family [detail] 831756
13.0 P40 40s ribosomal protein SA [detail] 843569
9.3 AT5G47210 Hyaluronan / mRNA binding family [detail] 834767
8.5 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) [detail] 827845
6.9 XW6 Ribosomal protein S5 family protein [detail] 842207
Coexpressed
gene list
[Coexpressed gene list for AT3G09630]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258715_at
258715_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258715_at
258715_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258715_at
258715_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 820120    
Refseq ID (protein) NP_001030663.1 
NP_187574.1 


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