| functional annotation |
| Function |
NAC domain containing protein 52 |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0034720 [list] [network] histone H3-K4 demethylation
|
(5 genes)
|
IMP
|
 |
|
GO:0010267 [list] [network] ta-siRNA processing
|
(15 genes)
|
IMP
|
|
|
GO:0060966 [list] [network] regulation of gene silencing by RNA
|
(25 genes)
|
IMP
|
|
|
GO:0048573 [list] [network] photoperiodism, flowering
|
(94 genes)
|
IMP
|
|
|
GO:0016441 [list] [network] post-transcriptional gene silencing
|
(105 genes)
|
IMP
|
|
|
GO:0002237 [list] [network] response to molecule of bacterial origin
|
(118 genes)
|
IEP
|
|
|
GO:0006351 [list] [network] DNA-templated transcription
|
(159 genes)
|
IDA
|
|
|
GO:0045892 [list] [network] negative regulation of DNA-templated transcription
|
(205 genes)
|
IDA
IMP
|
|
|
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem
|
(287 genes)
|
IGI
|
|
|
GO:0009555 [list] [network] pollen development
|
(376 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
GO:0000976 [list] [network] transcription cis-regulatory region binding
|
(708 genes)
|
IDA
|
|
|
GO:0043565 [list] [network] sequence-specific DNA binding
|
(890 genes)
|
IDA
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1576 genes)
|
IDA
ISS
|
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001327892.1
NP_001327893.1
NP_566375.1
NP_850554.1
|
| BLAST |
NP_001327892.1
NP_001327893.1
NP_566375.1
NP_850554.1
|
| Orthologous |
[Ortholog page]
NAC050 (ath)
LOC7463465 (ppo)
LOC25484825 (mtr)
LOC100782028 (gma)
LOC100808783 (gma)
LOC101265545 (sly)
LOC103847517 (bra)
LOC103847527 (bra)
LOC103859348 (bra)
LOC103859349 (bra)
LOC103870463 (bra)
LOC108178985 (sly)
|
Subcellular
localization
wolf |
|
chlo 6,
nucl 3
|
(predict for NP_001327892.1)
|
|
chlo 6,
nucl 3
|
(predict for NP_001327893.1)
|
|
chlo 7,
mito 1,
cyto 1,
plas 1,
cyto_mito 1,
cyto_plas 1
|
(predict for NP_566375.1)
|
|
chlo 6,
nucl 2,
cyto 1
|
(predict for NP_850554.1)
|
|
Subcellular
localization
TargetP |
|
mito 8,
other 6
|
(predict for NP_001327892.1)
|
|
mito 8,
other 6
|
(predict for NP_001327893.1)
|
|
other 3
|
(predict for NP_566375.1)
|
|
other 3
|
(predict for NP_850554.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03040 |
Spliceosome |
8 |
 |
Genes directly connected with NAC052 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 9.5 |
NAC050 |
NAC domain containing protein 50 |
[detail] |
820212 |
| 6.8 |
RS41 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
[detail] |
835279 |
| 6.5 |
ELF5 |
proline-rich family protein |
[detail] |
836385 |
|
Coexpressed
gene list |
[Coexpressed gene list for NAC052]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
At3g10490 Gene
