ATTED-II : GeneID search result

[←][→] ath AT3G10880 Gene

functional annotation

Function

tropomyosin

GO BP

GO CC

GO:0005774 [list] [network] vacuolar membrane	(624 genes)	IBA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

KEGG

Protein

NP_001327509.1 NP_001327510.1 NP_001327511.1 NP_187699.2

BLAST

NP_001327509.1 NP_001327510.1 NP_001327511.1 NP_187699.2

Orthologous

[Ortholog page] AT5G05180 (ath) LOC4337926 (osa) LOC25489811 (mtr) LOC25489813 (mtr) LOC25496799 (mtr) LOC25500970 (mtr) LOC25500971 (mtr) LOC100260478 (vvi) LOC100502230 (zma) LOC100812535 (gma) LOC100820407 (gma) LOC101253166 (sly) LOC103847562 (bra) LOC103870423 (bra)

Subcellular
localization
wolf

nucl 6, cyto_nucl 4, nucl_plas 4, cyto 1, plas 1	(predict for NP_001327509.1)
nucl 4, cyto_nucl 4, cyto 1, chlo 1, extr 1, vacu 1, pero 1, chlo_mito 1	(predict for NP_001327510.1)
nucl 6, cyto_nucl 4, nucl_plas 4, cyto 1, plas 1	(predict for NP_001327511.1)
nucl 4, cyto_nucl 4, cyto 1, chlo 1, extr 1, vacu 1, pero 1, chlo_mito 1	(predict for NP_187699.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001327509.1)
other 8	(predict for NP_001327510.1)
other 8	(predict for NP_001327511.1)
other 8	(predict for NP_187699.2)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT3G10880]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258768_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258768_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258768_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820258
Refseq ID (protein)	NP_001327509.1
	NP_001327510.1
	NP_001327511.1
	NP_187699.2

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