[][] ath   AT3G11780 Gene
functional annotation
Function   MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
GO BP
GO:0032366 [list] [network] intracellular sterol transport  (7 genes)  IEA  
GO CC
GO:0099503 [list] [network] secretory vesicle  (169 genes)  HDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
KEGG
Protein NP_001189862.1  NP_566400.1 
BLAST NP_001189862.1  NP_566400.1 
Orthologous [Ortholog page] AT5G06480 (ath)LOC4334363 (osa)LOC4342446 (osa)LOC7455603 (ppo)LOC7469934 (ppo)LOC25483672 (mtr)LOC25483673 (mtr)LOC100193299 (zma)LOC100244437 (vvi)LOC100257110 (vvi)LOC100273402 (zma)LOC100306050 (gma)LOC100788929 (gma)LOC101246195 (sly)LOC101246488 (sly)LOC101249001 (sly)LOC103845979 (bra)LOC103846989 (bra)LOC103850621 (bra)LOC103859408 (bra)LOC103870309 (bra)
Subcellular
localization
wolf
extr 6,  vacu 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  E.R._vacu 1  (predict for NP_001189862.1)
extr 7,  vacu 1,  cyto 1,  mito 1,  E.R._vacu 1  (predict for NP_566400.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001189862.1)
scret 9  (predict for NP_566400.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G11780 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.5 AT3G11800 Expp1 protein [detail] 820353
7.1 AT3G51730 saposin B domain-containing protein [detail] 824336
7.0 COR413-PM2 cold-regulated 413-plasma membrane 2 [detail] 824247
7.0 AT4G28770 Tetraspanin family protein [detail] 828998
6.0 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein [detail] 840134
5.7 AT2G38480 Uncharacterized protein family (UPF0497) [detail] 818430
Coexpressed
gene list
[Coexpressed gene list for AT3G11780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258788_at
258788_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258788_at
258788_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258788_at
258788_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 820352    
Refseq ID (protein) NP_001189862.1 
NP_566400.1 


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