ATTED-II : GeneID search result

[←][→] ath At3g12080 Gene

functional annotation

Function

GTP-binding family protein

GO BP

GO:0042793 [list] [network] plastid transcription	(13 genes)	IMP
GO:0009793 [list] [network] embryo development ending in seed dormancy	(697 genes)	IMP NAS

GO CC

GO:0005829 [list] [network] cytosol	(2559 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	HDA IDA ISM

GO MF

GO:0003729 [list] [network] mRNA binding

(1535 genes)

IDA

KEGG

Protein

NP_001078139.1 NP_187815.2

BLAST

NP_001078139.1 NP_187815.2

Orthologous

[Ortholog page] LOC4350988 (osa) LOC7482318 (ppo) LOC25492568 (mtr) LOC100777588 (gma) LOC101251249 (sly) LOC103870279 (bra) LOC123085949 (tae) LOC123091234 (tae) LOC123096204 (tae) LOC123442700 (hvu)

Subcellular
localization
wolf

chlo 5, mito 4	(predict for NP_001078139.1)
mito 5, chlo 4	(predict for NP_187815.2)

Subcellular
localization
TargetP

chlo 8	(predict for NP_001078139.1)
chlo 8	(predict for NP_187815.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with emb2738 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
13.2	RAP	RAP	[detail]	817747
12.0	PDE312	Nucleic acid-binding, OB-fold-like protein	[detail]	824009
9.2	AT2G39670	Radical SAM superfamily protein	[detail]	818550
9.2	TIC40	hydroxyproline-rich glycoprotein family protein	[detail]	831524
6.0	AT1G78010	tRNA modification GTPase	[detail]	844136

Coexpressed
gene list

[Coexpressed gene list for emb2738]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256274_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256274_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256274_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820382
Refseq ID (protein)	NP_001078139.1
Refseq ID (protein)	NP_187815.2

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