[←][→] ath   At3g12120 Gene
functional annotation
Function   fatty acid desaturase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006636 [list] [network] unsaturated fatty acid biosynthetic process  (24 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  NAS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0016720 [list] [network] delta12-fatty acid dehydrogenase activity  (1 genes)  IGI  
GO:0050184 [list] [network] phosphatidylcholine desaturase activity  (1 genes)  IEA  
GO:0102985 [list] [network] delta12-fatty-acid desaturase activity  (1 genes)  IEA  
GO:0045485 [list] [network] omega-6 fatty acid desaturase activity  (2 genes)  IDA  
KEGG ath01040 [list] [network] Biosynthesis of unsaturated fatty acids (25 genes)
ath01212 [list] [network] Fatty acid metabolism (70 genes)
Protein NP_001319529.1  NP_187819.1 
BLAST NP_001319529.1  NP_187819.1 
Orthologous [Ortholog page] cevi19 (sly)  FAD2-1A (gma)  FAD2-2 (gma)  FAD2-3 (gma)  LOC4330523 (osa)  LOC4343026 (osa)  LOC7455763 (ppo)  LOC7479530 (ppo)  LOC7483273 (ppo)  LOC7483979 (ppo)  LOC11444765 (mtr)  LOC18094295 (ppo)  LOC25483518 (mtr)  LOC25485564 (mtr)  FAD2-2D (gma)  FAD2-2B (gma)  FAD2-1B (gma)  LOC101250481 (sly)  LOC101259966 (sly)  LOC103870276 (bra)  LOC109119181 (sly)  LOC123128186 (tae)  LOC123130860 (tae)  LOC123134421 (tae)  LOC123138008 (tae)  LOC123145288 (tae)  LOC123145289 (tae)  LOC123145293 (tae)  LOC123145295 (tae)  LOC123404177 (hvu)  LOC123404258 (hvu)  LOC123405501 (hvu) 
Subcellular
localization
wolf
chlo 4,  E.R. 3,  mito 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001319529.1)
chlo 4,  E.R. 3,  mito 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_187819.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319529.1)
other 7  (predict for NP_187819.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with FAD2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 TCTP translationally controlled tumor protein [detail] 820916
7.6 UBC8 ubiquitin conjugating enzyme 8 [detail] 834173
7.5 AT4G31290 ChaC-like family protein [detail] 829256
6.3 XBAT31 uncharacterized protein [detail] 817433
6.2 FAD3 fatty acid desaturase 3 [detail] 817548
5.2 PRXR1 Peroxidase superfamily protein [detail] 828285
Coexpressed
gene list		 [Coexpressed gene list for FAD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256277_at
256277_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256277_at
256277_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256277_at
256277_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820387      
Refseq ID (protein) NP_001319529.1 
NP_187819.1 


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