[←][→] ath   At3g12710 Gene
functional annotation
Function   DNA glycosylase superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006284 [list] [network] base-excision repair  (16 genes)  IEA  
GO:0010200 [list] [network] response to chitin  (304 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0009617 [list] [network] response to bacterium  (1192 genes)  IEA  
GO CC
GO MF
GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity  (8 genes)  IEA  
KEGG ath03410 [list] [network] Base excision repair (41 genes)
Protein NP_566433.1 
BLAST NP_566433.1 
Orthologous [Ortholog page] AT5G44680 (ath)  LOC4327631 (osa)  LOC7462135 (ppo)  LOC7481612 (ppo)  LOC7491462 (ppo)  LOC7497551 (ppo)  LOC11445011 (mtr)  LOC25502437 (mtr)  LOC100789505 (gma)  LOC100791725 (gma)  LOC100793449 (gma)  LOC100793991 (gma)  LOC100811352 (gma)  LOC101246304 (sly)  LOC101258999 (sly)  LOC103848479 (bra)  LOC103870233 (bra)  LOC117133034 (bra)  LOC123062307 (tae)  LOC123071079 (tae)  LOC123079443 (tae)  LOC123444616 (hvu) 
Subcellular
localization
wolf
chlo 3,  nucl 3,  mito 2,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_566433.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for NP_566433.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT3G12710 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.1 AT3G07010 Pectin lyase-like superfamily protein [detail] 819886
9.3 AT5G48900 Pectin lyase-like superfamily protein [detail] 834948
9.0 AT5G22310 trichohyalin-like protein [detail] 832291
8.9 AT1G52190 Major facilitator superfamily protein [detail] 841649
8.7 LNG1 longifolia1 [detail] 831411
8.6 AT4G32460 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) [detail] 829381
7.7 GRH1 GRR1-like protein 1 [detail] 828045
7.3 PRA1.F1 prenylated RAB acceptor 1.F1 [detail] 838346
6.8 P1R3 uncharacterized protein [detail] 822596
6.2 AT1G75590 SAUR-like auxin-responsive protein family [detail] 843894
5.9 AT5G66310 ATP binding microtubule motor family protein [detail] 836763
5.8 AT4G24275 uncharacterized protein [detail] 828530
5.6 MDP40 uncharacterized protein [detail] 838914
5.3 AT1G25230 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 839105
4.4 AT5G27220 Frigida-like protein [detail] 832780
4.4 AT5G49800 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 835043
Coexpressed
gene list		 [Coexpressed gene list for AT3G12710]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257701_at
257701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257701_at
257701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257701_at
257701_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820453      
Refseq ID (protein) NP_566433.1 


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