[←][→] ath   At3g12780 Gene
functional annotation
Function   phosphoglycerate kinase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019253 [list] [network] reductive pentose-phosphate cycle  (7 genes)  IMP  
GO:0019375 [list] [network] galactolipid biosynthetic process  (13 genes)  IGI  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IGI  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO CC
GO:0010319 [list] [network] stromule  (37 genes)  IDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  HDA  
GO MF
GO:0004618 [list] [network] phosphoglycerate kinase activity  (2 genes)  IDA  
GO:0004672 [list] [network] protein kinase activity  (768 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_187884.1 
BLAST NP_187884.1 
Orthologous [Ortholog page] LOC543279 (tae)  AT1G56190 (ath)  PGK (ath)  LOC4328435 (osa)  LOC4339204 (osa)  LOC4341792 (osa)  LOC7460679 (ppo)  LOC7481598 (ppo)  LOC7492954 (ppo)  LOC7496585 (ppo)  LOC9268592 (osa)  LOC11421966 (mtr)  LOC11424739 (mtr)  LOC11441786 (mtr)  LOC100795933 (gma)  LOC100796458 (gma)  LOC100801951 (gma)  LOC100802480 (gma)  LOC101253805 (sly)  LOC101254111 (sly)  LOC103830478 (bra)  LOC103832426 (bra)  LOC103849710 (bra)  LOC103853201 (bra)  LOC103859466 (bra)  LOC103870225 (bra)  LOC123132578 (tae)  LOC123144162 (tae)  LOC123154557 (tae)  LOC123160475 (tae)  LOC123166750 (tae)  LOC123182478 (tae)  LOC123406238 (hvu)  LOC123411329 (hvu)  LOC123443752 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_187884.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_187884.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00710 Carbon fixation in photosynthetic organisms 4
ath01230 Biosynthesis of amino acids 4
ath00010 Glycolysis / Gluconeogenesis 3
ath03010 Ribosome 3
Genes directly connected with PGK1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.9 AT1G11860 Glycine cleavage T-protein family [detail] 837733
11.6 APG1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 825516
11.1 ROC4 rotamase CYP 4 [detail] 825376
10.0 TIM triosephosphate isomerase [detail] 816652
8.8 AT1G56190 Phosphoglycerate kinase family protein [detail] 842072
8.5 AT1G16080 nuclear protein [detail] 838178
8.3 LPA3 Low PSII Accumulation 3 [detail] 843637
8.0 EMB3119 Ribose 5-phosphate isomerase, type A protein [detail] 819639
7.0 ADG1 ADP glucose pyrophosphorylase 1 [detail] 834883
5.3 FAD7 fatty acid desaturase 7 [detail] 820288
Coexpressed
gene list		 [Coexpressed gene list for PGK1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257699_at
257699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257699_at
257699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257699_at
257699_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820461      
Refseq ID (protein) NP_187884.1 


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