[←][→] ath   AT3G12780 Gene
functional annotation
Function   phosphoglycerate kinase 1  
GO BP
GO:1903862 [list] [network] positive regulation of oxidative phosphorylation  (2 genes)  IBA  
GO:0019375 [list] [network] galactolipid biosynthetic process  (13 genes)  IGI  
GO:0019253 [list] [network] reductive pentose-phosphate cycle  (18 genes)  IEA IMP  
GO:0006094 [list] [network] gluconeogenesis  (20 genes)  IBA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IGI  
GO:0006096 [list] [network] glycolytic process  (62 genes)  IBA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IBA IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO CC
GO:0010319 [list] [network] stromule  (33 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004618 [list] [network] phosphoglycerate kinase activity  (2 genes)  IBA IDA  
GO:0043531 [list] [network] ADP binding  (127 genes)  IBA  
GO:0004672 [list] [network] protein kinase activity  (1017 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IBA  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (116 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_187884.1 
BLAST NP_187884.1 
Orthologous [Ortholog page] AT1G56190 (ath)  PGK (ath)  LOC4328435 (osa)  LOC4339204 (osa)  LOC4341792 (osa)  LOC7460679 (ppo)  LOC7481598 (ppo)  LOC7492954 (ppo)  LOC7496585 (ppo)  LOC9268592 (osa)  LOC11421966 (mtr)  LOC11424739 (mtr)  LOC11441786 (mtr)  LOC100244419 (vvi)  LOC100249576 (vvi)  LOC100274579 (zma)  LOC100281237 (zma)  LOC100795933 (gma)  LOC100796458 (gma)  LOC100801951 (gma)  LOC100802480 (gma)  LOC101253805 (sly)  LOC101254111 (sly)  LOC103635817 (zma)  LOC103830478 (bra)  LOC103832426 (bra)  LOC103849710 (bra)  LOC103853201 (bra)  LOC103859466 (bra)  LOC103870225 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_187884.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_187884.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00710 Carbon fixation in photosynthetic organisms 4
ath01230 Biosynthesis of amino acids 4
ath03010 Ribosome 4
ath00010 Glycolysis / Gluconeogenesis 3
Genes directly connected with PGK1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.0 ROC4 rotamase CYP 4 [detail] 825376
10.8 APG1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 825516
10.7 CSP41A chloroplast stem-loop binding protein of 41 kDa [detail] 825489
10.1 TIM triosephosphate isomerase [detail] 816652
9.3 AT1G11860 Glycine cleavage T-protein family [detail] 837733
9.0 AT1G56190 Phosphoglycerate kinase family protein [detail] 842072
9.0 DHAR3 dehydroascorbate reductase 1 [detail] 831532
8.3 LPA3 Low PSII Accumulation 3 [detail] 843637
7.7 AT1G16080 nuclear protein [detail] 838178
7.5 EMB3119 Ribose 5-phosphate isomerase, type A protein [detail] 819639
Coexpressed
gene list		 [Coexpressed gene list for PGK1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257699_at
257699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257699_at
257699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257699_at
257699_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820461      
Refseq ID (protein) NP_187884.1 


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