[←][→] ath   AT3G13180 Gene
functional annotation
Function   NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein  
GO BP
GO:0070475 [list] [network] rRNA base methylation  (16 genes)  IBA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0009383 [list] [network] rRNA (cytosine-C5-)-methyltransferase activity  (2 genes)  IBA  
KEGG
Protein NP_187924.2 
BLAST NP_187924.2 
Orthologous [Ortholog page] LOC4347368 (osa)  LOC7485114 (ppo)  LOC11426017 (mtr)  LOC100253242 (vvi)  LOC100280262 (zma)  LOC100779327 (gma)  LOC101247890 (sly)  LOC103849752 (bra) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_187924.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_187924.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with AT3G13180 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.9 EMB269 GTP1/OBG family protein [detail] 831975
9.9 PPD5 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 831016
9.5 FSD3 Fe superoxide dismutase 3 [detail] 832395
8.9 PDE327 FAD/NAD(P)-binding oxidoreductase family protein [detail] 829195
8.7 GCP1 glycoprotease 1 [detail] 819135
8.7 OVA5 Lysyl-tRNA synthetase, class II [detail] 820551
8.6 AT3G63510 FMN-linked oxidoreductases superfamily protein [detail] 825526
8.0 LSMT-L Rubisco methyltransferase family protein [detail] 837964
6.2 PAC pale cress protein (PAC) [detail] 819424
6.2 AT1G76050 Pseudouridine synthase family protein [detail] 843937
6.2 AT4G21770 Pseudouridine synthase family protein [detail] 828265
6.1 GLY1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein [detail] 818664
Coexpressed
gene list		 [Coexpressed gene list for AT3G13180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257180_at
257180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257180_at
257180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257180_at
257180_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820508      
Refseq ID (protein) NP_187924.2 


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