[←][→] ath   AT3G13230 Gene
functional annotation
Function   RNA-binding KH domain-containing protein  
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_001326485.1  NP_566450.1 
BLAST NP_001326485.1  NP_566450.1 
Orthologous [Ortholog page] LOC4331393 (osa)  LOC11444321 (mtr)  LOC100249193 (vvi)  LOC100254291 (vvi)  LOC100274503 (zma)  LOC100283335 (zma)  LOC100784865 (gma)  LOC100788055 (gma)  LOC101268583 (sly)  LOC102659733 (gma)  LOC103870187 (bra)  LOC107276702 (osa) 
Subcellular
localization
wolf
cyto 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001326485.1)
cyto 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_566450.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001326485.1)
other 9  (predict for NP_566450.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with AT3G13230 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.9 AT1G31660 bystin-like protein [detail] 840053
13.8 RID2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835833
12.8 AT1G80750 Ribosomal protein L30/L7 family protein [detail] 844414
12.2 AT1G18850 hypothetical protein [detail] 838466
11.7 AT4G15770 RNA binding protein [detail] 827257
11.5 AT1G75670 DNA-directed RNA polymerase [detail] 843901
10.6 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 820738
10.4 AT1G06380 Ribosomal protein L1p/L10e family [detail] 837149
10.3 AT1G04945 HIT-type Zinc finger family protein [detail] 5007664
9.1 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 832138
8.6 AT5G24840 tRNA (guanine-N-7) methyltransferase [detail] 832553
6.4 AT1G26470 chromatin modification-like protein [detail] 839188
Coexpressed
gene list		 [Coexpressed gene list for AT3G13230]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257658_at
257658_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257658_at
257658_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257658_at
257658_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820521      
Refseq ID (protein) NP_001326485.1 
NP_566450.1 


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